Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g4123 ATGGATTCCCATCATGAAGCAATTCCACATGCTTCTACTAGGAGTGATTCTGATGATGATGTCATAGAGATTAATAATGTTGATGAGAGCAACAGAGAAGGAGTAGTAGCGGTGATGGAAGGTTTGAACATTTCAAGAAGTAGTAATAGTGGTGGGAGAGAAGAAGAGGTTCCAATATACATGACATGGAAGGATGTATGGGTGGGAAAGAATGAGAGCAAATCGATCCTGGAGGGTCTGACTGGTTATGCCAAGCCAGGCCAGCTTTTGGCCATTATGGGTCCTTCTGGATCTGGCAAGTCTACTCTTCTTGATGCTTTGGGAGGGAGATTAAGTTCAAACACAAGACAAACAGGGAAGATTCTAATCAATGGTCGCAAGCAATCATTGGCTTATGGAACCACGGCATATGTGACACAAGATGATAGCTTAATAACATCATTAACAGTGAGAGAAGCAGTGTACTATTCAGCTCAGCTTCAGTTGCCTGATTCCATGTCAAAGGCAGAGAAGAAAGAGAGAGCAGAGTTCACAATTAGAGAGATGGGTTTGCAAGATGCCATCAACACTAGAATTGGTGGCTGGGGTTGCAAAGGAATCAGCGGTGGTCAGAAGAGACGTGTAAGCATCTGCATTGAGATATTAACACGCCCAAGGCTCTTGTTTCTTGATGAACCAACAAGTGGACTTGACAGTGCTGCCTCTTACTATGTCATGAAAAGAATTAAATCTCTTGATCATAAAGATGGTATTCAAAGGACTATCATAGCTTCAATTCATCAGCCAAGTGCTGAAGTTTTTCAATTCTTTGATAATCTCTGTTTGCTCTCTGCTGGCAAAACAGTTTACTTTGGACCTGCTTCTGATGCAATTCAGTTTTTCGCTTCCAATGGTTTTCCTTGTCCTGCTCTTCAAAACCCCTCAGATCATATGCTAAAAACTATAAACAAGGACTTCGATCAGGAAAATGAGCTGGCTCCTGATGATGGTGGGAATGGAATCATACCAACAGAAGAAGTAATCCGGATTCTTGTAAACTCATATAACTCATCTGAGATGAACCAACAAGTTCAAGCTGAAGTAGCAATGCTTTCTGAAACGGAAAGTATTTGCCAAGACAAGAAGAGAAGTCATGGTGGGTTTATTAGTCAGTGCATTGTTCTGAGCAAAAGATCATTCCTAAACATGTCTCGTGATTTAGGCTATTACTGGATACGCCTTGTCGCATATATGGGGATGGCTATTTGTTTAGGAACTGTCTTCTATGATATAAGCACCACCAATAACTCAATTAAGGACAGAGGTTCATTTCTTACATTTGTGTCTACATTCATGACTTTCATGAGCATCGGTGGATTCCCTTCCTTTGTAGAAGACATGAAGGTATTTGAACGAGAAAGGCTAAATGGGCATTATGGTGTGTGCGCCTTTGTAATTGGAAACACATTATCCGGCATCCCATTCGTATTACTAGTTTCATTGATTCCGGGAACAATTGCATATTACCTAGCTGGCCTTCAAAATGGATGCAAGCAAGTTGTTTACTTCTTGAGCGTGTTGTTATCTTGTGTTATGTTAGTGGAAAGCCTCATGATGATAATTGCTGCCATAGTCCCAAACTACCTATTGGGAATCATGACAGGTTCTGCAATCCAAGGACTCATGATTCTGCTTGCTGGCTTCTTTAAATTGCCCAGTGACATTCCTAGGCCACTTTGGAAATACCCTTTGCACTACATGGCTTTCCATCGATATGCCTTTCAAGGATTGTTCAAGAACGAATTTCAAGGCCTAAAGTTTGCTACCAAAAACAACAATATTATTGTTACTGGTGAGGAGATTCTGAGGGACACATTTGAAGTGGACAACAGTTACTCAAAGTGGCTTGATCTATTAGTGTTGGTGGGGATGCTTGTTTTGTATCGAGTTCTATTTTTGGTTATCATTAAGGGTACGGAGAAGGTTAAGCCTTTTGTTGCATCCTTCAAACTGGTGTCTCCCAAGAAAACAATACATGTCATGGAAAATCCAAATGCCACCCCTCCTACTCATGGACACTACCTTGTATAA 2070 0.4101 MDSHHEAIPHASTRSDSDDDVIEINNVDESNREGVVAVMEGLNISRSSNSGGREEEVPIYMTWKDVWVGKNESKSILEGLTGYAKPGQLLAIMGPSGSGKSTLLDALGGRLSSNTRQTGKILINGRKQSLAYGTTAYVTQDDSLITSLTVREAVYYSAQLQLPDSMSKAEKKERAEFTIREMGLQDAINTRIGGWGCKGISGGQKRRVSICIEILTRPRLLFLDEPTSGLDSAASYYVMKRIKSLDHKDGIQRTIIASIHQPSAEVFQFFDNLCLLSAGKTVYFGPASDAIQFFASNGFPCPALQNPSDHMLKTINKDFDQENELAPDDGGNGIIPTEEVIRILVNSYNSSEMNQQVQAEVAMLSETESICQDKKRSHGGFISQCIVLSKRSFLNMSRDLGYYWIRLVAYMGMAICLGTVFYDISTTNNSIKDRGSFLTFVSTFMTFMSIGGFPSFVEDMKVFERERLNGHYGVCAFVIGNTLSGIPFVLLVSLIPGTIAYYLAGLQNGCKQVVYFLSVLLSCVMLVESLMMIIAAIVPNYLLGIMTGSAIQGLMILLAGFFKLPSDIPRPLWKYPLHYMAFHRYAFQGLFKNEFQGLKFATKNNNIIVTGEEILRDTFEVDNSYSKWLDLLVLVGMLVLYRVLFLVIIKGTEKVKPFVASFKLVSPKKTIHVMENPNATPPTHGHYLV* 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g4123 689 Pfam ABC-2 type transporter 384 595 IPR013525 GO:0016020|GO:0140359
Ahy13g4123 689 ProSitePatterns ABC transporters family signature. 200 214 IPR017871 GO:0005524
Ahy13g4123 689 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 61 303 IPR003439 GO:0005524
Ahy13g4123 689 SMART AAA_5 86 280 IPR003593 -
Ahy13g4123 689 MobiDBLite consensus disorder prediction 1 21 - -
Ahy13g4123 689 Pfam ABC transporter 79 228 IPR003439 GO:0005524
Ahy13g4123 689 Gene3D - 52 298 IPR027417 -
Ahy13g4123 689 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 40 681 - -
Ahy13g4123 689 PANTHER WHITE-BROWN-COMPLEX ABC TRANSPORTER FAMILY PROTEIN 40 681 - -
Ahy13g4123 689 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 62 295 IPR027417 -
Ahy13g4123 689 Pfam ABC-2 type transporter 260 316 IPR043926 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g4123 Ahy-Chr13 140742669 140747669 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g4123 43 242 Calmodulin-binding Proteins AT2G36910 28.972 5.49e-10 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g4123 K05681 - gmx:100813462 910.983
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4123 13 140742669 140747669 Ahy3g3849 3 137890808 137896381 hybridization