Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g4102 ATGGCTGACGTCAAGTGCTATGTTCCCCCTAATCAATTTAATATTGAGCAAATTCTTATAGAAGCGCAGCGTCGATGGCTGCGCCCAGCTGAAATTTGTGAAATTCTCAGTAATTATAAAATGTTCCAAATTGCTCCAGAGCCTGCACATATGCCGCCAAGTGGTTCACTTTTCCTGTTTGATCGGAAGGTGCTGAGATACTTTAGAAAGGATGGCCACAACTGGAGAAAGAAAAAGGATGGAAAAACAGTGAGGGAAGCTCATGAGAGACTTAAGGCTGGAAGTGTGGATGTGTTGCACTGCTATTATGCACACGGAGAAGAAAATGAAAATTTTCAAAGACGCACATACTGGATGCTTGATGAGGAACTCTCGCACATTGTTCTTGTCCATTATAGGGAAGTGAAGGCAACTAAGGCAAATTTTAGAGGTGCTGCCAAAGAAAATCAAGAATCTCTTCCTTATGCACAAATTGACAAACTACCAGGTTCCACAGAGAAGGAAATTTTTTTATCATGTAGTCTTCATCCACATAACTACCAGGTTCCATCACATACAATAGATACAACAAGCATGAAGAGCACTCAAGCAACAGAATATGAAGAAGCTGAGTCAGTGTTTACAGCATTGAATAATTATGCAAGTTCAGAAGACTACTCCTTCCTTGAGACACAACACCCAGTTGTTGAGAAGATTCCTGATCCTTATTGCCCGCCACAGTTCATAAATGAACAAGAGAAGTTGTGTGGCACTCCTGGGATGAATCATATCATGCTCAGTCAAGCTGGCAAAATCAAAGACATTCATAATGTTAGATTGGCATATGAACCCCCACAACACCTTGGCTTTTCAATGTGGGAATATATCTTGGAAAATAATGGGAGAAGTCAATACATGCCTCTTCAACCCGTACTCCCTGAAATCCAACCTGATAACATGGGAATCAATAGCAATCCCTCTCTAATGAGGTCAAATTTCACCACCAATATTACCAAAGTGAATGGGAAAGAAAATATGGTACAAGTTGAAGGAAATTGGCAGGTAATGAATGAGTTATATGAATTTGATCCTCAAAGATCCTTGGAACAGTGTCTTATACATCAAGATAAACCAAAGGTTCTTATGATAGATGACCCTCAAGAAAAACTATTAGATGCAAAAGAGAAGATAGAAACCAATAGAAGCCTGGATGGAATAGATGATACAAATTTAACTCTAAAGAAGGCTCTGTTAGATGGATCCCTTGCAGAAGAGGGTCTGAAGAAGCTTGACAGTTTCAACCAATGGATGAGTAAAGAACTTGGAGATGTGGAAGAATCTAAAACTCCATCCACTTTTAGTGCTTATTGGGGTACAGTTGAAAATGAAAATGATGTGGACAATGCAACTATTCCTTCTGAAGTGCACCTGGATACCTATGCACTGGATCCATCTATTTCCCATGATCAACTTTTTACTATTATTGACTTTTCCCCAAGCTGGGCATTTGAAGGTTCAGAAACTAAGATTCTCATTTATGGACAATTCTTGAGGAGTCTACAGGAAGCTGAACAATGTAAATGGTCTTGCATGTTCGGTGAGGTAGAAGTGCCAGCTAATATCATTGACAATGGTGTTCTTTCTTGTTATACTCCTCCACATAAAACTGGGAGGATTCCTTTCTATGTAACTTGTTCCAATAGGTTAGCATGTAGTGAAATACGAGAATTTGATTTCCGAGACATTTACACTCAAGAAGTCAACAATGCAGCTGAGCAGAGAGAGAGCATTTCTGATAATTTCAGTGTGCGATTTGAAGAGCTGCTGTACATGGGGCATACCTTACCTCAAAACTTCGATCCAATCAGTGTAAGCGAGAAATCTGAACTGAGAAGTAAAATAAGTTCTTTGCTGAGGAAGGAGGAGGATGATTGGGATAAGCTGCTGAAACTTACTCTAGAGAAAGATTTTTCTCCACAAAATGTACAGGAGCATCTGCTTCAAAATCTTTTGAAAGATAAGTTACTTGGGTGGCTCCTTCAAAAAGTCATCGAAGATGGGAAAGGCCCTAATGTATTGGATGAGGGTGGCCAAGGAGTACTTCATCTTGCGGCTGCTCTTGGCTATGATTGGGCCTTACAACCCACAGTAATTGCTGGTGTAAATGTGAACTTCTGCGATGTAAATGGATGGACTGCTCTTCATTGGGCTGCATTCTGTGGCAGGGAGCTCACAGTTGCTTCCCTCATCTCTCTTGGCGCAGCACCTGGGGTGCTGACTGATCCAAGCCCAGAGCATCCTTCTGGTAGAACACCAGCTGACCTGGCTTCTGCAAACGGTCACAAAGGAATTGCAGGGTATCTTGCAGAATCTTCAATAAGCGTGCAACTATTATCTCTTGATATGAACAGGGACACGAGAGAAAGTTCTGGATCAAAAGTAGTATACAGAGTCCAACACAATACTACTGAAGTTAATGATGATCGCCTATCATATGAACTGTCACTGAAAGATTCACTGGCAGCAGTGTGTAATGCCAGCCAGGCTGCTGCACGTATTCATGAAGTTTATAGAGTGCAATCTTTCCAAAGAAAACAACTGAAAGAATATGATGATAAATTTGGAATATCTGATGAAGATGCTCTTTCTCTTATAACTGTAAAACCACACAAGGTTGGACAACGCAATGAGCCTGTACATGCAGCTGCAATACGAATCCAGAACAAATTCCGCAGTTGGAAGGGCAGAAAAGAATTTTTGATGATTCGCCAAAGAATAGTTAAAATTCAGGCTCATGTAAGGGGGCACCAGGTTAGGAAGAACTGTGGAAAGATAATTTGGTCAGTTGGAATTTTAGAAAAAGTTATTTTGCGCTGGCGCCGAAAAGGTAGTGGTTTACGTGGATTTAAATTGGAAGATGTTCCCGAGGGAACTATGGTACAAGATACACAGTGCAAGGAGGATGAGTATGATTTCTTGAAAGAAGGCAGAAAGCAAACAGAGGAAAGGTTGCAGAAAGCCCTATCCAGGGTGAAGTCAATGGTTCAGTATCCAGAGGCAAGAGACCAATACCATAGGCTGTTGAATGTTGTAACTGAGATCCAAGAAAACCAGCTAAAACATCATAGGAGTTCAGAAGAGAGAAGAGAATTTGATAACCTCATTGATCTTGAAACTTTGCTGGACGAGGATACTTTCATGCTTACAGTCATTTAG 3195 0.4078 MADVKCYVPPNQFNIEQILIEAQRRWLRPAEICEILSNYKMFQIAPEPAHMPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVREAHERLKAGSVDVLHCYYAHGEENENFQRRTYWMLDEELSHIVLVHYREVKATKANFRGAAKENQESLPYAQIDKLPGSTEKEIFLSCSLHPHNYQVPSHTIDTTSMKSTQATEYEEAESVFTALNNYASSEDYSFLETQHPVVEKIPDPYCPPQFINEQEKLCGTPGMNHIMLSQAGKIKDIHNVRLAYEPPQHLGFSMWEYILENNGRSQYMPLQPVLPEIQPDNMGINSNPSLMRSNFTTNITKVNGKENMVQVEGNWQVMNELYEFDPQRSLEQCLIHQDKPKVLMIDDPQEKLLDAKEKIETNRSLDGIDDTNLTLKKALLDGSLAEEGLKKLDSFNQWMSKELGDVEESKTPSTFSAYWGTVENENDVDNATIPSEVHLDTYALDPSISHDQLFTIIDFSPSWAFEGSETKILIYGQFLRSLQEAEQCKWSCMFGEVEVPANIIDNGVLSCYTPPHKTGRIPFYVTCSNRLACSEIREFDFRDIYTQEVNNAAEQRESISDNFSVRFEELLYMGHTLPQNFDPISVSEKSELRSKISSLLRKEEDDWDKLLKLTLEKDFSPQNVQEHLLQNLLKDKLLGWLLQKVIEDGKGPNVLDEGGQGVLHLAAALGYDWALQPTVIAGVNVNFCDVNGWTALHWAAFCGRELTVASLISLGAAPGVLTDPSPEHPSGRTPADLASANGHKGIAGYLAESSISVQLLSLDMNRDTRESSGSKVVYRVQHNTTEVNDDRLSYELSLKDSLAAVCNASQAAARIHEVYRVQSFQRKQLKEYDDKFGISDEDALSLITVKPHKVGQRNEPVHAAAIRIQNKFRSWKGRKEFLMIRQRIVKIQAHVRGHQVRKNCGKIIWSVGILEKVILRWRRKGSGLRGFKLEDVPEGTMVQDTQCKEDEYDFLKEGRKQTEERLQKALSRVKSMVQYPEARDQYHRLLNVVTEIQENQLKHHRSSEERREFDNLIDLETLLDEDTFMLTVI* 1065
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g4102 1064 Gene3D - 890 938 - -
Ahy13g4102 1064 Coils Coil 983 1003 - -
Ahy13g4102 1064 ProSiteProfiles CG-1 DNA-binding domain profile. 15 141 IPR005559 GO:0003677
Ahy13g4102 1064 SUPERFAMILY Ankyrin repeat 674 785 IPR036770 -
Ahy13g4102 1064 Gene3D - 651 794 IPR036770 -
Ahy13g4102 1064 ProSiteProfiles IQ motif profile. 915 939 IPR000048 GO:0005515
Ahy13g4102 1064 SMART ANK_2a 761 790 IPR002110 GO:0005515
Ahy13g4102 1064 SMART ANK_2a 722 751 IPR002110 GO:0005515
Ahy13g4102 1064 SMART CG_1_2 18 136 IPR005559 GO:0003677
Ahy13g4102 1064 Pfam CG-1 domain 21 134 IPR005559 GO:0003677
Ahy13g4102 1064 ProSiteProfiles IQ motif profile. 893 921 IPR000048 GO:0005515
Ahy13g4102 1064 Pfam IPT/TIG domain 486 562 IPR002909 -
Ahy13g4102 1064 ProSiteProfiles Ankyrin repeat profile. 722 754 IPR002110 GO:0005515
Ahy13g4102 1064 Gene3D Immunoglobulins 480 575 IPR013783 -
Ahy13g4102 1064 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 2 1 1031 - -
Ahy13g4102 1064 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 884 941 IPR027417 -
Ahy13g4102 1064 SMART iq_5 891 913 IPR000048 GO:0005515
Ahy13g4102 1064 SMART iq_5 914 936 IPR000048 GO:0005515
Ahy13g4102 1064 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 1 1031 - -
Ahy13g4102 1064 Pfam IQ calmodulin-binding motif 917 934 IPR000048 GO:0005515
Ahy13g4102 1064 Pfam IQ calmodulin-binding motif 893 912 IPR000048 GO:0005515
Ahy13g4102 1064 Pfam Ankyrin repeats (3 copies) 694 788 IPR002110 GO:0005515
Ahy13g4102 1064 SUPERFAMILY E set domains 486 572 IPR014756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g4102 Ahy-Chr13 140529800 140536802 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g4102 59 1061 CAMTA Transcription Factor Family AT2G22300 48.359 0.0 860
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Ahy13g4102 Ank_2 8.20E-07 CL0465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g4102 K21596 - gmx:100783055 1505.35