Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g4097 ATGGGTCGCGGCAAGTGCATGTTCGCACCTACGAAGATATGGTGCCGCAAGATCAATGTCAACCATAAGCGATACGCCGTCGTTTTCGCCATTGTTGCCTTAGTCATTCCCTTATTTGTTGTCGCACACAACTATCATATTGACATTGTGCCGAATCTTCCTCTCGTTATCTCAGATGTTGCTGAAGTCATTGAGAAGACAAAAGAAGCATCCAATGTCTGGAGATCCACACAATTCGTCTTGAAAAGGGAAAAATATGTAATCGCCGATACATTTCAGAAAAAGGGACCTCATGTTGTGTACGAATCGAAGGAGTTAAGGATGTTAAAGAGTTCTGGAACATTTTTGGTGTTGAGGTTGCAAATATTGAGAAAATCAATTTGTATGAAATTGGTGCTTGGTGGACACCTTAAAAGGTTTGTGATATGA 429 0.4103 MGRGKCMFAPTKIWCRKINVNHKRYAVVFAIVALVIPLFVVAHNYHIDIVPNLPLVISDVAEVIEKTKEASNVWRSTQFVLKREKYVIADTFQKKGPHVVYESKELRMLKSSGTFLVLRLQILRKSICMKLVLGGHLKRFVI* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g4097 142 PANTHER 60S RIBOSOMAL PROTEIN L4 1 142 IPR045240 -
Ahy13g4097 142 Gene3D - 1 142 IPR023574 GO:0003735|GO:0005840|GO:0006412
Ahy13g4097 142 SUPERFAMILY Ribosomal protein L4 4 104 IPR023574 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g4097 Ahy-Chr13 140509948 140510376 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g4097 1 142 Cytoplasmic Ribosomal Protein Gene Family AT3G09630 36.810 1.26e-24 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g4097 K02930 - aip:107633893 285.034