Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g4071 ATGGGAGTATTCACATTCGTTCTCCGCAAATCCGGCGCCGAGTGGACTGCGAAGCAGCACTCCGGCGACATCGAGGACTCCGCCTCCTCCACCTACGACCTCCAACGCAAGCTCGTCAATGCCGCTCGCGCCGCTGATTCCTCCGGCGCCGTTCAGTCCTCTTTCTCTTTCGTTTCTCCCTCCTCTGCTGTCTTCCAGGTGGTTGTGGGTGGTGCAGTCTTCGTTGGAGGTGGTGCTGTTGCTGCTGCTCCTGCTGGTGGTGCTGCCGCAGAGAGCGCCGCTGCCCCTGCTGCCGAGAAGAAAGAAGAGAAGGTCGAGGAAGAGGAAGATGAAGATTTTGGAATGTCACTCTTTGATTAA 360 0.5778 MGVFTFVLRKSGAEWTAKQHSGDIEDSASSTYDLQRKLVNAARAADSSGAVQSSFSFVSPSSAVFQVVVGGAVFVGGGAVAAAPAGGAAAESAAAPAAEKKEEKVEEEEDEDFGMSLFD* 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g4071 119 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P3-1-RELATED 1 119 IPR044252 GO:0003735|GO:0005840
Ahy13g4071 119 MobiDBLite consensus disorder prediction 91 119 - -
Ahy13g4071 119 MobiDBLite consensus disorder prediction 104 119 - -
Ahy13g4071 119 Pfam 60s Acidic ribosomal protein 50 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g4071 Ahy-Chr13 140180213 140181293 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g4071 1 68 Cytoplasmic Ribosomal Protein Gene Family AT5G57290 73.529 2.01e-30 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g4071 K02942 - gmx:100527385 95.9005