Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g4048 ATGCTAGAGACTGGTGGTGCTGCTGCACCTGATTCTGAGCTCACTTTGGACACTGCAAATTGCACGCAACGAAGCTCTAACAGCACCCAAAGCAACTGCAGCACCAGCTTCAGCCGTCTCTCCTTTGACCTCGTCCCCCCCTCTTCGCCGGAAAATCTTTCCCTCAAGCCTCACCGCTCCTCCGACTTTGCCTATTCCGCCATCCTCCGCCGCAAGACGGCCCTCACCTTTCACGACTTCTGCCTCATCCGCCGCATCGGCGCCGGAGACATCGGCACAGTCTACCTCTGCCGCCTCCGCAACAGTGACAACAAAGACGAAGAAGAAGAAAAACTTAATCCGAACTGCCTGTACGCTATGAAGGTAGTGGACAAAAACGCCGTGGCACTAAAGAAAAAATCACAGAGAGCCGAAATGGAGAGAAGGATCCTGAAGATGCTGGACCATCCTTTCCTCCCTACCCTCTACGCGGAGTTCGAAGCCTCGCACTTCTCTTGCATCGTCATGGAGTTTTGCTCCGGTGGAGACTTGCACTCCCTCCGCCACAAGTTCCCTCACAATCGTTTTCCCTTAACTTCCGCAAGGTTTTATGCTGCTGAAGTGTTGGTGGCATTAGAGTACCTTCACATGCTGGGAATCATTTACAGGGATCTCAAACCCGAGAACGTGTTAGTCAGATCAGACTGTCACATCATGCTCTCCGATTTTGATCTTTCTCTCTGCTCAGATGCAATCCCAGCCGTTCAATCCTCTGATTGCTTCCACGATACTTCCTTCCCATCCGCATTGCAATACTCTGCCACACACACTACCCCGTTTTCGTGCTTCCCCAATCGGATGTTCCGATCACGTAAAGTCCAAACCGTTCAACCAGACCGGCTCTTCGTGGCCGAACCGGTCTCCGCCCGGTCATGCTCTTTCGTTGGGACGCACGAGTATGTCTCGCCGGAGGTAGCAGCCGGTGGATCACACGGCAATGCCGTGGACTGGTGGTCATTCGGGGTATTCATCTACGAGCTAATATACGGTCGTACGCCGTATGTGGCTCAATCGAACGAAGCTACACTGCGAAACATCATAAAGAATCCCCTGAGGTTCCCTACGGCCACGCCCTCTAGCGCGCTTGAGCATCACGCGCGGGACCTCATCTGCGGCTTGCTTCACAAGGACCCTGGTCAGAGGCTGGGTTCGAAGCGCGGCGCTGCTGACGTCAAGAAGCATCCGTTTTTCAAAGGGCTCAACATGGCGCTGATTCGCATGTTGACGCCACCACAAGTCCCCGGCTTGAAAAGACACAAAACGACGTCGTGGCTGACAAAGGACGATAGTAATAATCTTTTCAGCAACAGTAACAAACAGTATTCTACGGCGTCGTTTGACTATTTCTTTTGA 1392 0.5295 MLETGGAAAPDSELTLDTANCTQRSSNSTQSNCSTSFSRLSFDLVPPSSPENLSLKPHRSSDFAYSAILRRKTALTFHDFCLIRRIGAGDIGTVYLCRLRNSDNKDEEEEKLNPNCLYAMKVVDKNAVALKKKSQRAEMERRILKMLDHPFLPTLYAEFEASHFSCIVMEFCSGGDLHSLRHKFPHNRFPLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDCHIMLSDFDLSLCSDAIPAVQSSDCFHDTSFPSALQYSATHTTPFSCFPNRMFRSRKVQTVQPDRLFVAEPVSARSCSFVGTHEYVSPEVAAGGSHGNAVDWWSFGVFIYELIYGRTPYVAQSNEATLRNIIKNPLRFPTATPSSALEHHARDLICGLLHKDPGQRLGSKRGAADVKKHPFFKGLNMALIRMLTPPQVPGLKRHKTTSWLTKDDSNNLFSNSNKQYSTASFDYFF* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g4048 463 ProSitePatterns Serine/Threonine protein kinases active-site signature. 213 225 IPR008271 GO:0004672|GO:0006468
Ahy13g4048 463 PANTHER FLIPPASE KINASE 1-RELATED 1 463 - -
Ahy13g4048 463 SUPERFAMILY Protein kinase-like (PK-like) 58 438 IPR011009 -
Ahy13g4048 463 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 1 463 - -
Ahy13g4048 463 ProSiteProfiles Protein kinase domain profile. 80 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g4048 463 Gene3D Transferase(Phosphotransferase) domain 1 172 240 - -
Ahy13g4048 463 Pfam Protein kinase domain 83 239 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g4048 463 Pfam Protein kinase domain 304 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g4048 463 SMART serkin_6 80 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g4048 463 Gene3D Phosphorylase Kinase; domain 1 78 171 - -
Ahy13g4048 463 Gene3D Transferase(Phosphotransferase) domain 1 303 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g4048 Ahy-Chr13 139918069 139920043 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g4048 11 462 AGC Kinase Gene Family AT2G34650 65.359 0.0 570
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Ahy13g4048 Pkinase 3.40E-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g4048 - - gmx:100795536 671.389
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4048 13 139918069 139920043 Ahy13g4048 13 139918069 139920043 ECH
Ahy13g4048 13 139918069 139920043 Ahy3g3771 3 137118357 137120313 hybridization