Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g4027 ATGAAACCTGTTTTTGTGCTTCTCCTAATCTTTATTGTGTTTCCTACAAGGCCATTCTCAGCATCATCATCATCATCATCATCTCCCACCATTTCCCATGGTAGCAACAATTCTGTGTGCCCAGTGGGAATGGATTATGTGCTGACAGTCCCCTGGAACTCCTCTAGCTGCCATAACTTCCAACCTTTCCCATCCAAAAACAAAACACGTTCAAGTTTTTGTTGCACAGCTCTGTTATCCCTCTTTGGCATAGCACTTGCTCAAAACCTCAAAGAAAACTCTCTTTTCCAGTTCCCGAATCTTCCTACCTCAAAATCCTGCCTTCATCACTTCCAATCCAAGCTCAGTGCTCTCTCACTTCCAAACAACCTTGTTTCCTCTTGTTTTGACCCGCTTCAATTTGTTATCAGTCCCAACCTATGCGCTAACATCCAATCTAAGCAAGACTGGATCAACAATCTTGGTCCTACAACTCGGTTCAACGATGCCTGTAAGCCAGACCTCAGTGTCTCTGCCAACTGCGACATTTGTGTCACAGAAGGTCTAAATGTTCTGCAAAAGATGAATGTTATTGATGGAAATGCTTCTCATTCCCAAGACTGTTTTTATTTTTCAATTCTATATGCTGCTGGAATCGCAAACGAGCTTGGCCCTGAAAGCAGAGGTGCTATGTCTTGTATTTATGAGTTGCCACTTATTAATGATCAAGGGAGAGGTGCCAGAAGAAAGAGCCATAATCATGCTCTTGTATTTGGTTTAATTGGAGCTTCAATTGGAATCTTGGTTGTGTCTTCCTTGATAGGTTTGTGTCTATGCTACAACAGGTTGGGGACGAGAAAAGCTGCTGAGAATTTGTATGTCTGTGCTGAACCGACAGTGCAAGGGTCTAGGACTCAAGTGAGACCAAATACAGGGTCAATTTGGTTCAAGTTTGAGGACCTAGTGAAGGCCACTAACAATTTTTCAACCCAGAACTTCATTGGCAGAGGTGGTTCTGGCTTAGTTTACAAGGGCATTCTACCTGATGGCACAATGGTTGCAGTTAAAAGGATAGAAGAATCGGATTCTCAAGGAGATGAAGAATTCTACAGGGAGGTGGACATTATTAGCAACTTGAAACACCGCAATCTAGTGCTGCTAAGAGGGTGTTGTGTGGCTGTTAAAGAAGAGGAAGAGGATTCTGGGTACAGAGAAAGCCAAAGATATCTTGTTTATGATTACATGCCAAATGGTAGCCTTGAAGACCATCTCTTCTCTTCCATGGACAACCGAAATATGAAGAAATCACTTACTTGGTCTCAAAGAAAGAGCATAATCTTGGATGTGGCAAATGGGTTGGTCTATTTGCACTTTGGAGTTAAACCTGCAATCTATCACAGAGATATCAAAACCACCAATATACTTCTTGATGCAGGTATGAATGCAAGAGTTGCTGATTTCGGGTTAGCTAAACAAAACTTTGAAAGTAGGTCTCTGATAAACACAAGAGTTGCTGGAACTCATGGGTACCTGGCACCAGAATATGCACTTTATGGCCAGTTATCTGAAAAGAGTGATGTCTATAGTTTTGGTGTGGTTATATTGGAAATATTGTGTGGAAGAAAAGCTCTTGATTTATCTTCATCCGGAACACCTGCATTCTTTATCTCAGATTGGGTTTGGTCATTGCTGAAATCTGGTAACTTAGAATCAGCTTTGGATGCTTCTATGTTAATAGATGAAAACCTTACTAGTAGGAAAATAATAGAAAGATTCTTAATGGTTGGTGTTCTGTCTTCTCATGTAGTAGCTGATTCAAGGCCAATAATTTTGGATGCTTTGAAGATGTTAGAAGGGGATATTGAGATTCCACCAATTCCAGATAGGCCAATGGCTCTTGCACACCATGTGTTTCCCATAGTTATTTAG 1908 0.4114 MKPVFVLLLIFIVFPTRPFSASSSSSSSPTISHGSNNSVCPVGMDYVLTVPWNSSSCHNFQPFPSKNKTRSSFCCTALLSLFGIALAQNLKENSLFQFPNLPTSKSCLHHFQSKLSALSLPNNLVSSCFDPLQFVISPNLCANIQSKQDWINNLGPTTRFNDACKPDLSVSANCDICVTEGLNVLQKMNVIDGNASHSQDCFYFSILYAAGIANELGPESRGAMSCIYELPLINDQGRGARRKSHNHALVFGLIGASIGILVVSSLIGLCLCYNRLGTRKAAENLYVCAEPTVQGSRTQVRPNTGSIWFKFEDLVKATNNFSTQNFIGRGGSGLVYKGILPDGTMVAVKRIEESDSQGDEEFYREVDIISNLKHRNLVLLRGCCVAVKEEEEDSGYRESQRYLVYDYMPNGSLEDHLFSSMDNRNMKKSLTWSQRKSIILDVANGLVYLHFGVKPAIYHRDIKTTNILLDAGMNARVADFGLAKQNFESRSLINTRVAGTHGYLAPEYALYGQLSEKSDVYSFGVVILEILCGRKALDLSSSGTPAFFISDWVWSLLKSGNLESALDASMLIDENLTSRKIIERFLMVGVLSSHVVADSRPIILDALKMLEGDIEIPPIPDRPMALAHHVFPIVI* 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g4027 635 Pfam SPARK 36 202 IPR043891 -
Ahy13g4027 635 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 35 622 - -
Ahy13g4027 635 Gene3D Phosphorylase Kinase; domain 1 289 407 - -
Ahy13g4027 635 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 35 622 - -
Ahy13g4027 635 ProSiteProfiles Protein kinase domain profile. 321 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g4027 635 SMART serkin_6 321 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g4027 635 Gene3D Transferase(Phosphotransferase) domain 1 408 616 - -
Ahy13g4027 635 Pfam Protein kinase domain 323 538 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g4027 635 ProSitePatterns Protein kinases ATP-binding region signature. 327 349 IPR017441 GO:0005524
Ahy13g4027 635 ProSitePatterns Serine/Threonine protein kinases active-site signature. 457 469 IPR008271 GO:0004672|GO:0006468
Ahy13g4027 635 SUPERFAMILY Protein kinase-like (PK-like) 297 575 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g4027 Ahy-Chr13 139717922 139721045 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g4027 35 628 Receptor kinase-like Gene Family AT1G11050 58.194 0.0 655
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Ahy13g4027 Pkinase 1.50E-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g4027 - - gmx:100788367 780.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4027 13 139717922 139721045 Ahy3g3751 3 136903921 136906393 hybridization
Ahy20g0908 20 11712007 11714839 Ahy13g4027 13 139717922 139721045 PCT
Ahy10g0642 10 6442179 6444944 Ahy13g4027 13 139717922 139721045 PCT