Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g4021 ATGGATAATAATAATAATATCAAGAAAGAACAAGTCTTCTTACATGGTGACTTGGATATTTATGTAATAGAAGCAAAATCTCTTCCAAACTTGGATCTTTCTTCAGAAGCAGTAAGAAGATGCCTGAGCATGGGGAACTTCTTCACATCACCATTCTCAAAGAAAATGAGGAGTTCAGGGAAAGATAAGATGATAACAAGTGACCCTTATGTCTCTGTAGTCATAGCAGGTGCTACCATAGCTCAAACTAGAGTGATTCCAAACAGCGAAAACCCGATTTGGGACGAGCATTTCATCATGCCGGTTGCTCACCCTGCTCACAAGATTGAGTTCATTGTGAAGGACAATGATGTTCTTGGTGCTGAGTTAATTGGTGTAGTTGATATTCCTGTTCAGAGGGTAGTCTCAGGGGAAAACATAGATGATTGGTTTCCAATCATCGGACAGTACTCGAATTGCTTGCAGGCTTATCCTGAGCTGCATATTTCGATTCAGTTTTGGCCGGTCGGAGGCGTTAAAGACGATATTTGTAGTGGTGATAGTGGAGTTCCTAAGACATATTTTCCATTGAGGAAAGGAGGGAATGTGACTCTGTATCAAGATGCACATGTTCCTGATGGAATGCTACCTGATATTGAATTGGATGGTGGGAAAGTGTTTCAAGCTGGTAAATGTTGGGAGGACATTTGCCATGCAATTTTGGAAGCTCATCATTTGATATATGTTATTGGTTGGTCAGTTTATCATCCAATAAAGCTTGTTAGAGAGCCAACAAGGCCATTGCCTTGTGGTGGAGAGCTTTCACTTGGAGAGTTGTTGAAGTACAAATCACAAGAAGGTCTTAGAGTTGTTATGCTCATTTGGGATGACAGAACTTCACATGACAAGTTCCTTATCAAAACTGATGGAGTGATGCAAACTCATGATGAGGAGACCAAAAAGTTCTTTAAAAACTCTGCTGTTCATTGCGTGCTATCTCCGCGTTATGCAAGCAATAAGCTCAGTATTTTCAAGCAACAGGTTGTGGGAACCCTCTTTACTCATCATCAGAAATGTGTGCTTGTTGACTCACAAGGTGCAGGGAATAATCGGAAAATATCTGCTTTTATTGGTGGTCTGGATCTCTGTGATGGCAGATATGATACACCTCAGCATAGGCTATTTCGCGATTTAGAAACCGTTTACAAAGAGGATTTTCATAATCCTACATTTCAAGTAGGTTCTAGTGGAGGTGGACCAAGAGAGCCATGGCATGACATGCATTGCAAGGTTGAAGGGCCAGCAGCTTATGATATATTAACCAATTTTGAACAAAGATGGAGGAAAGCCAAAAAATGGCGAGACTTTAGACTCAACAAGGTCACGAATTGGCACGACGATGCATTGCTAAGGCTAGACCGGATATCATGGATTGTCAGTCCATCTTCGAGTTCTGGTGATGATAAAGCTATCCAGGTGACCGATGAAAATGATCCTGAAACTTGGAATGTGCAGGTATTTCGGTCCATAGATTCAGGATCCGTGAAGGGTTTTCCAAAGGATTTCGACAAGGCTCAGTCTCAGAATCTTTTATGTGGAAAGAATTTAAAAGTAGACCAAAGCATTCATACTGCTTATGTTAAAGCAATAAGATCAGCTCAACACTTCATTTATATTGAGAATCAGTATTTTCTGGGCTCATCATATCATTGGCCTTCATATGAAAAAGCAGGTGCAAATCACTTGATTCCAATGGAGTTGGCCTTAAAAATTTCTAGCAAGATCCGAGCGAATGAACGTTTTGCTGTATACATAGTTATACCAATGTGGCCAGAGGGGGTTCCAACAAGTAATGCTGTTCAGGAAATCTTATTCTGGCAGGGACAAACAATGGCTATGATGTATAAGATCATTGCAGATGCACTTAAAGATGCTCAAGTCTCCCATATATATCATCCACATGATTTTCTCAACTTTTTCTGCCTTGGAAATAGAGAACCTGAGGCCACACCAACTCCATCACCACATAGAGAATCATCTGAAAACCGTGGTTTGGGATCAGTCAAGAAATTCAAACGTTTCATGATTTATGTTCATGCCAAAGGAATGATAGTTGATGATCAATACGTAATCATTGGATCAGCAAACATTAACCAGAGATCAATGGATGGTTCAAGAGACACAGAAATAGCCATGGGTGCTTATCAACCAAAATATACTTGGAAAGAAAAAAAGTCGCAGCCACATGGCCAGGTGTATGGATACCGGATGTCGCTGTGGGCCGAGCACCTTGGCAGTCTTGATGACAGATTCAAAGAGCCCCATAGCTTGGAATGTGTGAGGACTATGAACAACATAGCCAAACAAAACTGGAACACATTTGCATCCGATAGAATCAGTCATATGAAAGGGCATTTGATGCTGTATCCAGTTAAGGTTGGCAGAGATGGAAAAGTCACTGCACTTGATAATTGTGATTCATTTCCTGATGTTGGTGGCAAAATTCTTGGAGCTGCAAATTCTCTTCCAGACACCTTAACTACGTGA 2526 0.4086 MDNNNNIKKEQVFLHGDLDIYVIEAKSLPNLDLSSEAVRRCLSMGNFFTSPFSKKMRSSGKDKMITSDPYVSVVIAGATIAQTRVIPNSENPIWDEHFIMPVAHPAHKIEFIVKDNDVLGAELIGVVDIPVQRVVSGENIDDWFPIIGQYSNCLQAYPELHISIQFWPVGGVKDDICSGDSGVPKTYFPLRKGGNVTLYQDAHVPDGMLPDIELDGGKVFQAGKCWEDICHAILEAHHLIYVIGWSVYHPIKLVREPTRPLPCGGELSLGELLKYKSQEGLRVVMLIWDDRTSHDKFLIKTDGVMQTHDEETKKFFKNSAVHCVLSPRYASNKLSIFKQQVVGTLFTHHQKCVLVDSQGAGNNRKISAFIGGLDLCDGRYDTPQHRLFRDLETVYKEDFHNPTFQVGSSGGGPREPWHDMHCKVEGPAAYDILTNFEQRWRKAKKWRDFRLNKVTNWHDDALLRLDRISWIVSPSSSSGDDKAIQVTDENDPETWNVQVFRSIDSGSVKGFPKDFDKAQSQNLLCGKNLKVDQSIHTAYVKAIRSAQHFIYIENQYFLGSSYHWPSYEKAGANHLIPMELALKISSKIRANERFAVYIVIPMWPEGVPTSNAVQEILFWQGQTMAMMYKIIADALKDAQVSHIYHPHDFLNFFCLGNREPEATPTPSPHRESSENRGLGSVKKFKRFMIYVHAKGMIVDDQYVIIGSANINQRSMDGSRDTEIAMGAYQPKYTWKEKKSQPHGQVYGYRMSLWAEHLGSLDDRFKEPHSLECVRTMNNIAKQNWNTFASDRISHMKGHLMLYPVKVGRDGKVTALDNCDSFPDVGGKILGAANSLPDTLTT* 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g4021 841 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 14 169 IPR035892 -
Ahy13g4021 841 SMART C2_3c 17 143 IPR000008 -
Ahy13g4021 841 SUPERFAMILY Phospholipase D/nuclease 183 448 - -
Ahy13g4021 841 Pfam PLD-like domain 629 723 IPR025202 -
Ahy13g4021 841 Pfam Phospholipase D Active site motif 345 379 IPR001736 GO:0003824
Ahy13g4021 841 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 687 714 IPR001736 GO:0003824
Ahy13g4021 841 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 344 379 IPR001736 GO:0003824
Ahy13g4021 841 Gene3D Endonuclease Chain A 218 462 - -
Ahy13g4021 841 Gene3D Endonuclease Chain A 492 742 - -
Ahy13g4021 841 ProSiteProfiles C2 domain profile. 1 144 IPR000008 -
Ahy13g4021 841 Gene3D C2 domain 12 166 IPR035892 -
Ahy13g4021 841 Pfam C2 domain 16 146 IPR000008 -
Ahy13g4021 841 CDD C2_plant_PLD 12 166 - -
Ahy13g4021 841 SMART pld_4 687 714 IPR001736 GO:0003824
Ahy13g4021 841 SMART pld_4 344 379 IPR001736 GO:0003824
Ahy13g4021 841 PANTHER PHOSPHOLIPASE D 9 841 IPR015679 -
Ahy13g4021 841 SUPERFAMILY Phospholipase D/nuclease 533 772 - -
Ahy13g4021 841 PIRSF PLD_plant 3 841 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Ahy13g4021 841 Pfam Phospholipase D C terminal 761 831 IPR024632 -
Ahy13g4021 841 PANTHER PHOSPHOLIPASE D 9 841 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g4021 Ahy-Chr13 139624209 139628308 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g4021 12 840 Phospholipase D Gene Family (Wang group) AT2G42010 54.302 0.0 934
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g4021 K01115 - gmx:100779740 1387.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4021 13 139624209 139628308 Ahy3g3747 3 136842104 136846089 hybridization