Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g4004 ATGGTGGCACTGGCCAATGCCATTGTGGCCACAGTGCTGGTGCTGGTGCTTGTGGCGGTGTTTCCACTGGGAAAGGCAGATCTGGCATCGGAGCGGGCGGCATTGCTGGCTCTACGGTCCTCCGTCGGCGGCAGAACCCTCTTCTGGAACGCGACCAACCAGAGCCCCTGCAACTGGGCTGGCGTGCAATGCGAGCAGGGTCAGGTGGTGGAGCTCCACCTGCCCGCCGTGGCACTCTCCGGGCGCATTCCGGTGGGAATATTCGGGAACCTGACACACCTCCGCACCCTGAGCCTGCGGTTCAACGCGCTGACGGGACCCCTCCCCGCAGATCTGGCATCGTGCATCAACCTCCGGAACCTGTACCTGCAGCGCAATCTGCTTTCCGGCGAAATCCCAGAGTTGCTGTTCCGGCTGCCGGACCTGGTCCGCCTGAACCTTGGCTTCAACAATTTCTCGGGTGGGGTCCCAGCAGAGTTCAACAAGTTGAGCAGACTTAGAACTCTTTACCTCCAAAACAATCAGCTCTCCGGTCCCATCCCGCAGCTCAGCCTGCCGGACCTCGAGCAGTTCAACGTCTCCAACAACTTCCTCAATGGCTCTGTCCCCGACAAGCTCCAGAAATTCCCCCAAGATTCCTTTCTTGGCAATTCCCTCTGCGGCCGCCCGCTCAAGCTCTGCCCCGGCGACGATGCATCTGCATCTTCTCCTTCCGGCGACATTCCCAATAACAAGACCAAGAAGAAGAACAAGTTATCTGGCGGTGCCATTGCTGGAATTGTCATCGGATCCGTCGTGTGTCTTCTGCTGCTCGTATTCGCACTGATTCTTTTGTGTAGGAAGAAGAGTTCCAAGAAGACCAGTGCCGTTGAAGTTGCAACCGTCAAGCATCCGGAGCCCGAACTTCCAGGCGACAAACCAGTGGACGAGTTGGAGAACGGGCCGGGGCCCCACAGTAATGGCGCTCACGAAAATGGGTATACGGTGGCTGCAGCAGCTGCAGCGGCTATGGCGGCAGGGAATGGAAACAAGGCCGAGGCCAACGGCGGCGGTGGTAGTGGAGCCAAGAAGTTGGTGTTTTTTGGTAATTCTGCAACAGCGGGGGCGGCGAGGCCATTTGATCTGGAGGATTTGCTTCGGGCTTCGGCGGAGGTATTGGGGAAAGGTACGTTTGGTACGGCGTACAAGGCGGTTTTGGAGTCAGGGCCGGTGGTGGCTGTGAAGAGGTTGAAGGATGTGACGATTTCCGAGAAGGAGTTCAAGGAGAAGATCGAGTCTGTGGGAGCAATGGATCATGAGAACTTGGTTCCTCTGAGGGCTTATTATTTCAGCAGAGATGAGAAGCTTCTTGTGTATGATTACATGCCCATCGGAAGCTTATCTGCTCTTTTGCATGGAAACAAAGGAGCGGGGAGGACACCGTTAAACTGGGAAATCAGGTCAGGCATTGCACTTGGAGCTGCACGCGGGATTGAATACCTTCACTCACAGGGAACAAATGTTTCTCATGGAAACATTAAGTCCTCTAATATCCTCTTAACCAAGTCCTACGATGCTAGAGTATCTGACTTCGGCCTCGCCCACCTTGTTGGCCCCTCCTCCACCCCTAACCGAGTGGCCGGCTATCGCGCCCCTGAGGTCACCGATCCTCGCAAAGTATCCCAGAAGGCAGATGTGTACAGCTTTGGCGTGCTGCTCTTGGAGCTACTGACCGGGAAGGCACCCACCCATGCTATCCTAAACGAGGAAGGAGTGGACCTCCCTAGATGGGTCCAATCCGTTGTCCGAGAAGAGTGGACTTCGGAGGTGTTTGATCTTGAGCTGCTGAGGTACCAGAATGTTGAAGAGGAGATGGTTCAGCTGTTGCAGCTTGCAGTTGATTGCGCAGCACCCTACCCTGATAAGCGCCCTTCCATGTCTCAAGTGGTACAGAGCATTGAAGAATTGCGTCGCTCCAGCTTGAAAGAGGATCAGGACCAAATCCAAACCCAACATGATCTTGTAGAGTTATAG 2013 0.5539 MVALANAIVATVLVLVLVAVFPLGKADLASERAALLALRSSVGGRTLFWNATNQSPCNWAGVQCEQGQVVELHLPAVALSGRIPVGIFGNLTHLRTLSLRFNALTGPLPADLASCINLRNLYLQRNLLSGEIPELLFRLPDLVRLNLGFNNFSGGVPAEFNKLSRLRTLYLQNNQLSGPIPQLSLPDLEQFNVSNNFLNGSVPDKLQKFPQDSFLGNSLCGRPLKLCPGDDASASSPSGDIPNNKTKKKNKLSGGAIAGIVIGSVVCLLLLVFALILLCRKKSSKKTSAVEVATVKHPEPELPGDKPVDELENGPGPHSNGAHENGYTVAAAAAAAMAAGNGNKAEANGGGGSGAKKLVFFGNSATAGAARPFDLEDLLRASAEVLGKGTFGTAYKAVLESGPVVAVKRLKDVTISEKEFKEKIESVGAMDHENLVPLRAYYFSRDEKLLVYDYMPIGSLSALLHGNKGAGRTPLNWEIRSGIALGAARGIEYLHSQGTNVSHGNIKSSNILLTKSYDARVSDFGLAHLVGPSSTPNRVAGYRAPEVTDPRKVSQKADVYSFGVLLLELLTGKAPTHAILNEEGVDLPRWVQSVVREEWTSEVFDLELLRYQNVEEEMVQLLQLAVDCAAPYPDKRPSMSQVVQSIEELRRSSLKEDQDQIQTQHDLVEL* 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g4004 670 MobiDBLite consensus disorder prediction 298 312 - -
Ahy13g4004 670 Pfam Leucine rich repeat 117 176 IPR001611 GO:0005515
Ahy13g4004 670 SUPERFAMILY Protein kinase-like (PK-like) 384 647 IPR011009 -
Ahy13g4004 670 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 5 668 - -
Ahy13g4004 670 MobiDBLite consensus disorder prediction 230 251 - -
Ahy13g4004 670 Gene3D Phosphorylase Kinase; domain 1 363 454 - -
Ahy13g4004 670 SUPERFAMILY L domain-like 47 209 - -
Ahy13g4004 670 Gene3D Ribonuclease Inhibitor 30 138 IPR032675 -
Ahy13g4004 670 CDD STKc_IRAK 386 649 - -
Ahy13g4004 670 Gene3D Transferase(Phosphotransferase) domain 1 455 669 - -
Ahy13g4004 670 Gene3D Ribonuclease Inhibitor 141 227 IPR032675 -
Ahy13g4004 670 PANTHER OS05G0588300 PROTEIN 5 668 - -
Ahy13g4004 670 Pfam Protein kinase domain 383 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g4004 670 MobiDBLite consensus disorder prediction 292 324 - -
Ahy13g4004 670 Pfam Leucine rich repeat N-terminal domain 29 64 IPR013210 -
Ahy13g4004 670 ProSitePatterns Protein kinases ATP-binding region signature. 386 408 IPR017441 GO:0005524
Ahy13g4004 670 ProSiteProfiles Protein kinase domain profile. 380 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g4004 Ahy-Chr13 139451565 139454406 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g4004 27 650 Receptor kinase-like Gene Family AT1G48480 65.094 0.0 808
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Ahy13g4004 Pkinase 1.50E-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g4004 - - gmx:100818955 949.888
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4004 13 139451565 139454406 Ahy3g3729 3 136638417 136641378 hybridization
Ahy13g4004 13 139451565 139454406 Ahy15g2571 15 140750913 140754121 PCT
Ahy13g4004 13 139451565 139454406 Ahy5g2624 5 102584770 102588026 PCT
Ahy15g2571 15 140750913 140754121 Ahy13g4004 13 139451565 139454406 PCT
Ahy5g2624 5 102584770 102588026 Ahy13g4004 13 139451565 139454406 PCT