Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g3992 ATGGAGTGCTATGGTGGGATGGGCAAGGCAAACGGTTTGTCTCCAGATGAAAGTGAAAATGAGTTAGGCCTTTCAAACAACGACGTTGTTGACGAGGATGACTTAAGAAAGGTTGAGTTGTTGTCGGATGAAGATGGTCGTGAATATGAAGACGTGAGTGGGTTGAGTGCAGAGGATATAATGAAAAAGGTGTTTCAAAGTGAAGAGCGTGCATATGAGTTTTATTATAGGGTAGGGAAATGCAATGGATTTGGGGTCTGTAAGGGAGACTATGAAAAGGATGAAGATGGGACTGTAGTGAGAAGGAGGTTCTTCTGTAATAGGGCTGGGCTAAGGGATGGAAAACACTACAACAGAGTAGACAGGAAGAGATGCCATAGGCCTGAGACACGCACGAATTGCCAGGCCCTGATGTCTGTATACCTTGATAAGGGAAGCTCGGTTTGGAAGGTTCGGAAAGTAATCTTCGAGCATAACCATGAATTGATACCAAGGGGAATGGTTCACATGCTCCGAAGTTTCCGGGCGATATCGGGTTCCGCAAAGGCCCACATGGATGAAATGCATGCGTATGGGTTGCCGACGTCTAAGATACTGGGGTACATGGCTGGGATTGCAGGTGGTTATTCTTGTTTGGGTTTTACCAAGAAAGACGCATACAACTATATTGATCGGTCAAAACGTACAAAGGTGGTTGATGGAGACATGAACGTTGCTATAGTCTACCTAGAAGGCAAGGCAGCTGCTGATCCCATGTCTATGGCCTGGTACAATTTGACTGAAGAAGGTATGTTGGCAAACATGTTTTGGGTAGATGGTCCTAGCGGGGTTGATTTTCAACATTTTGGAGACGTGGTTGTATTCGATTCAACGTATAAGAAGAACAAGTACAACAGACCCCTTGACATATTCTCAGGTTCAAACAACCACAAGCAAACAACGATTTTTGGTTTTGGTTTGGTTTTAGATGAGACAATCAGTTCATACAAGTGGATGCTGGAGAACTTGTTAGAAGTCATATGTGGGAAGATGCCCTCTGTTGTCGTGACCGACGGGGATGAATCAATGATAGCTGCAGTTAGGGAAGTGTTGCCCCGGCAACCCATAGGTTGTGTGCATGACATCTGCAGAAGAATGTGA 1140 0.45 MECYGGMGKANGLSPDESENELGLSNNDVVDEDDLRKVELLSDEDGREYEDVSGLSAEDIMKKVFQSEERAYEFYYRVGKCNGFGVCKGDYEKDEDGTVVRRRFFCNRAGLRDGKHYNRVDRKRCHRPETRTNCQALMSVYLDKGSSVWKVRKVIFEHNHELIPRGMVHMLRSFRAISGSAKAHMDEMHAYGLPTSKILGYMAGIAGGYSCLGFTKKDAYNYIDRSKRTKVVDGDMNVAIVYLEGKAAADPMSMAWYNLTEEGMLANMFWVDGPSGVDFQHFGDVVVFDSTYKKNKYNRPLDIFSGSNNHKQTTIFGFGLVLDETISSYKWMLENLLEVICGKMPSVVVTDGDESMIAAVREVLPRQPIGCVHDICRRM* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g3992 379 Pfam MULE transposase domain 285 376 IPR018289 -
Ahy13g3992 379 Pfam FAR1 DNA-binding domain 73 163 IPR004330 -
Ahy13g3992 379 PANTHER OS02G0262500 PROTEIN 58 367 - -
Ahy13g3992 379 MobiDBLite consensus disorder prediction 1 28 - -
Ahy13g3992 379 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 58 367 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g3992 Ahy-Chr13 139359382 139360521 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy13g3992 MULE 1.30E-19 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g3992 - - aip:107633916 785.023