Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g3960 ATGGTATTTGCTATAGACTTGAACACGCAGCCGTCATCAGAAGAAATTCACTCATTTGATACCCATATTGATATGGACGATATAAATATTTGTAATAGCTCAAGCAATTCTGCTACAGAAACTGAGTGCACGACTGAGGTCATAATTCATCCCACTATTTCTGATGAGGAGATTCCAAAAGTGGGGATGCTATTTGGAACCCTCGAAGAAGCACGCCAATTTTACTACAACTATGCCAATAAAGTGGGATTCGAGCCTCATATAAGAAACACTAACTTCCACAAGAATGGAAAAACACCCATTAACCAATCCATACAGTGTAATAGAGATGGATACCGAACAAAGAAGAATCCGGTAACCCATAGGTCAAACACAGTCTCATCTGTACACTGTAAAGCTCGCATCTATGTGAAACTTGACATAGAGCTTGAAAAATGGATACTGTCGAAGGTAGAATTAACTCACACGCATCGATGTGATCCCAGTTTGTCATGGATGTTTAAGAAAAACAGGGAACTCACCATGCACGTTAAGGATGTCATTGAACGCAACGACCAGGCTGCTGGTGGTCGTTCTAATCTGAAATTTCTTGAGAAGGATGTTAGAAATTATATATCTGGTAAACTCCGAATCAATGGAGATGATACTGATGCGCAAGAGATGCTGGACTATTTTACCAGGATGAAAGAGCAGAACCCGAATTTCTTCTACGACATTTGTCTCTATAGTGACAATAGTCTCAAGCATGCATTTTGGGCGGATGCTCGATCAAGAGCTGCTTACGAGTATTTTGGTGACGTGGTGTCATTTGACACCACATACAAACTCAACAAATATGAGATGCCAGTTGCAGCATTTGTGGGTGTTAATCACCACGGAAGGTCATGTCTTTTCGGGTGTGCTTTATTGGGCAACGAAGAGACTGAGTCCTTTGAATGGCTCATGCAAACATTTATAAAATGTATGGGAAAAACACCAGATGGAATCTTAACTGACCAATGCGGAGCCATGGCAACAGCCATTCGAAATGTCATGCCAAACACTAGGCATAGATTGTGCATTTGGCACATCACGAGAAAGATAAACTTGGAAAGTTGA 1098 0.4098 MVFAIDLNTQPSSEEIHSFDTHIDMDDINICNSSSNSATETECTTEVIIHPTISDEEIPKVGMLFGTLEEARQFYYNYANKVGFEPHIRNTNFHKNGKTPINQSIQCNRDGYRTKKNPVTHRSNTVSSVHCKARIYVKLDIELEKWILSKVELTHTHRCDPSLSWMFKKNRELTMHVKDVIERNDQAAGGRSNLKFLEKDVRNYISGKLRINGDDTDAQEMLDYFTRMKEQNPNFFYDICLYSDNSLKHAFWADARSRAAYEYFGDVVSFDTTYKLNKYEMPVAAFVGVNHHGRSCLFGCALLGNEETESFEWLMQTFIKCMGKTPDGILTDQCGAMATAIRNVMPNTRHRLCIWHITRKINLES* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g3960 365 PANTHER OS03G0843700 PROTEIN 37 361 - -
Ahy13g3960 365 Pfam FAR1 DNA-binding domain 73 160 IPR004330 -
Ahy13g3960 365 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 37 361 IPR031052 GO:0006355
Ahy13g3960 365 Pfam MULE transposase domain 267 359 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g3960 Ahy-Chr13 138983718 138985213 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy13g3960 MULE 1.20E-29 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g3960 - - ahf:112779187 724.931