Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g3943 ATGTTGGGCAGTTCTTCTTCTTCTCCTCCTCCTGCAATGAAGTATGATGTGTTTATCAGCTTCAGAGGGGAGGATACCCGTGACGGCTTCACCAGCCATCTCTGCACAGCACTGCGCAAGAGGCACATCGAAACTTACATGGATGACAGGCTTGTGAGAGGGGAAGAGATTTCACCCGCACTGGAGAAAGCAATTGAAGAATCCACCATTTATGTCATTGTTTTCTCCCAAGGCTATGCTTCTTCCCGGTGGTGTTTGGATGAACTCACCAAGATCATGGATTGCAAGCACAGATTCAGGAGGGAAGTGATTCCAGTGTTCTTTATGGTGGACCCGGCACACGTTAGGCATCAGATAGGAACTTATGGACAACCATTTGAGAAGCACCAACAGCGATACGAAGACAAAGTGCAGGGATGGAGATCTGCTCTAAACCAAGCAGCTAATCTCTCCGGATGGGATTCACGAGCATTCAGACCTGAATCCATTCTTGTTAAAGAGATTGTGGAAGATATTTGGACAAAATTGAATAGTCAATCCATTAATGATAATGGAGGACTTGTTGGAATTGACAAGCATATTCAACAAGTTGAGTCCATCTTGCATGGTGATTCAGCAGATTTTCGGATCATAGGGATTTGGGGCATGAGAGGAATAGGTAAAACAACAATTGCCCATGCATTATATCGTAAGCTGGCAACCCAATTCAGTTACACAAGGTTGTTTGACGATGTCTCAAAAAAAATTGAAGAGTACAAAAATGATGGAGGATATAAGGACAGGAGGCACATGCTTCAAAGACTGAAGGTTCTCCTCATTCTTGATAATGTGAACAGCGCAGATCAACTTGAGGATTTGATTGGAGGGCGTCATAGCTTTGGTCCGGGAAGTAGAATTATTGTGACTAGTAGTGACAAACAAGTGCTCAACAATGTAACTGATGAAATATATGAGGTTAAGAATATGGATTTTCAGGATTCTCTACAACTGTTCAGCTTACATGCCTTTAAACAAAACTACCCAATAGAATCCTACATGGAAGTATCAGAAAAGGTACTCAATTATGCTGAAGGGATTCCGTTAGCTCTCAAAGTTTTGGGCTATTTTCTTTATGGTAGAACAAGGGAAGCATGGGAAAGTGAGTTGCAAAAGTTGGAAAAACTTCCTAATCCTAAAATCTTCGATGTGTTGAAATTAAGTTTTGATGCGCTTGATGAGGAGCAACAAGATATATTTCTTGACATAGCCTGCTTTTATAGAGGGTATGAAGAGCATACTGCAAAACAAAAACTTAATGACTCTGGTTTCTCGGCTACCATTGGAATAGAAGTTCTCAAGGAGAGGTGCCTCATATCTGTTTTGAATCGGGAGATTGTGATGCATGACCTAATACAAGATATGGGACAAGAAATCATCCGTCGTCAAGGTGTCAACGATCCTGGAAAACGCAGTCGATTATTTAAGCATCAGGACATTTATCAAGTTTTAAAAAAGAACAAGGGGACAGATGCAATCCAATGTATCATGCTTGACATGTGCAAAATCAGAGAAGTTAACCTGCATGCTGAAACTTTCAACATGATGCATAAACTGAGAATGCTCCAATTCTACACGTCAAAGTCAGCTATACACTCAAATGTGCACATTCCTGAATTTCTTAACATTCTTCCGGAGGAGTTAAGATTTCTTCGTTGGGATGGTTTCCCCCAAATATCTTTGCCACAGGACTTTTGCCCAGAAAATCTTGTTGAACTCAATATGCGTGATAGCCATCTTGAACGACTCTGGGACGGACATCAGGATTTACCAAATTTGAAAAGACTTGACCTCAGTGGTTCTCGGAAGCTGATTCAAATACCAGACCTCTCGCAGTCTCCAAATATTGAAGAAATTATTCTTAGTCATTGTGTAAAGTTGGATGTCGTTTACTCCTCTAGTTTCCTTGCCAAGCTCAGCTGCTTATGGTTGGATGGTTGTTATGAGCTTAGGATTTTAAATCTTCCAAGTAGTATCCTATTGAAATCTCTTGGTGTAGTAGTTCTTTATAACTGTCATAGCCTTGAGATGTTTTCAGTCAGTAAAACAAGTGAGGGAGTTCTACCATCTGGCTGTTCACGTGATGGAACACGCAGATGGAAGGAAGAGAAAAAGTGTGCACCAGATGCACCACAAAGGCATTATTTTGATATTTTTCATCCCATTGTTAGTGCTAAAGAATATGAAAACACTGGGGACAATATACACTTACTGAGGTTTAAAGTGTTGAGAGAAGGTTCGCCCTCGTCGTTCCCAGGTCTTAAAGAGATTTGTTGGTTAGATCTCTCTAATTGCGAATCCCTCACAATCCTTCCAGTTGAACTTTTCCAGATGAAATTTCTAAAAAGACTTGATCTCTGTGGCTGCTCAAGTTTGGAAAGTTTACCTGAAATAAACCAGACTATGGAAAATTTAACTGTTCTCATCTTAGACAAAACAGGAATACAAGAACTACCTTCATCCTTGCACCATTTGGTAGGGCTCGAAGAATTGAGCTTGCATGGGTGCCGAAGGCTTGAGTTTATTCCATCTTCCATTGGAAGTCTAAGTAGACTCTGCAAGCTGGACCTTACCTACTGTGAATTGCTTGAAACTATTCCAAGCAGCATTTTTAAGTTGAAGTTGTCAAAACTTGATTTACACGGTTGCTCAAGGCTGAGGATTTTGCCAGAGATCATGGAAGCTGCAAAAAGTATTGCACACCTTCGGTTAACAAAAGCTGCAGTAAAAGAATTGCCTTTGTCATTGGACCATTTGGTAGGCCTTACAACGTTGTGCTTATCATTGTGCAGTGATCTAGAGTTCCTTCCGAGCAACATTGTTAATCTAAGCCTTCTCTCTGATCTCGATTGTTCTGGTTGTGTCAATTTAACAAAAATCCCAAATAACATTGATCGTTTGTCATCACTAAGAGAATTGTCATTGCAGGGAAGTGGTATTGTGAACCTTCCTGAGAGTATTGCTCATCTTTCAAGCTTGAAATCATTGGATTTAAGTGATTGCAAAATGCTTGAATGCATCCCTGTGCTTCCACCATTTCTAAAACAGTTATTGGCATTTGATTGCCCATCTGTTAGGAAAGTGTCAAGTTCCAGGCTTAAACTCCCACCAGATTCCAAGGAGGGTCTCTTCAAATTTCATTTCACCAACAGCCAAGAATTGGATCCAAATGATCATAGTATTGCTGCTAATGCATGTGATATGATTAACCAGGATGCATATAGGTCTGTGCTCTTCTGCTTTCCAGGGAGTGAAGTTCCTCATTGGTTCCCTTATCGATGCAGGGGAAATTCAGTTACTCTGGATCCAGGTTCTCTGAATCCGATCAACGGTGATAGGCTCATTGGTTTCGCACTGTGTGTAGTTTTAGGAAGCTCTGAAGATCAGAGAAATAAGGATAGGGAATTTCTCTTCGGACTCAAATTTGAATATGAAGGCATGCATCTTCTTGCCAATAATGATCTTTTAAGGAACTATTTCTACTGGAAGGGTAAACGTATATTCAAGGTCCATCATACTCTCGTGTGGAAATATACTTTGGAATCTTCAGCCATTAACTACATGCTCTCTCGTGCCCGAAACTTCAATTTTGAGATATGCGAAGAATCACATGGTGTACCAACTTCCAATGTAGTAGAATGTGGAATATGCCCTCTTTATTCCAAAGAGAAAGATAATGATTTTCCTGCTGGAGATTATTGGGTTCACTACAAGGTTTGCGCACCAGGTCACTGA 3771 0.4063 MLGSSSSSPPPAMKYDVFISFRGEDTRDGFTSHLCTALRKRHIETYMDDRLVRGEEISPALEKAIEESTIYVIVFSQGYASSRWCLDELTKIMDCKHRFRREVIPVFFMVDPAHVRHQIGTYGQPFEKHQQRYEDKVQGWRSALNQAANLSGWDSRAFRPESILVKEIVEDIWTKLNSQSINDNGGLVGIDKHIQQVESILHGDSADFRIIGIWGMRGIGKTTIAHALYRKLATQFSYTRLFDDVSKKIEEYKNDGGYKDRRHMLQRLKVLLILDNVNSADQLEDLIGGRHSFGPGSRIIVTSSDKQVLNNVTDEIYEVKNMDFQDSLQLFSLHAFKQNYPIESYMEVSEKVLNYAEGIPLALKVLGYFLYGRTREAWESELQKLEKLPNPKIFDVLKLSFDALDEEQQDIFLDIACFYRGYEEHTAKQKLNDSGFSATIGIEVLKERCLISVLNREIVMHDLIQDMGQEIIRRQGVNDPGKRSRLFKHQDIYQVLKKNKGTDAIQCIMLDMCKIREVNLHAETFNMMHKLRMLQFYTSKSAIHSNVHIPEFLNILPEELRFLRWDGFPQISLPQDFCPENLVELNMRDSHLERLWDGHQDLPNLKRLDLSGSRKLIQIPDLSQSPNIEEIILSHCVKLDVVYSSSFLAKLSCLWLDGCYELRILNLPSSILLKSLGVVVLYNCHSLEMFSVSKTSEGVLPSGCSRDGTRRWKEEKKCAPDAPQRHYFDIFHPIVSAKEYENTGDNIHLLRFKVLREGSPSSFPGLKEICWLDLSNCESLTILPVELFQMKFLKRLDLCGCSSLESLPEINQTMENLTVLILDKTGIQELPSSLHHLVGLEELSLHGCRRLEFIPSSIGSLSRLCKLDLTYCELLETIPSSIFKLKLSKLDLHGCSRLRILPEIMEAAKSIAHLRLTKAAVKELPLSLDHLVGLTTLCLSLCSDLEFLPSNIVNLSLLSDLDCSGCVNLTKIPNNIDRLSSLRELSLQGSGIVNLPESIAHLSSLKSLDLSDCKMLECIPVLPPFLKQLLAFDCPSVRKVSSSRLKLPPDSKEGLFKFHFTNSQELDPNDHSIAANACDMINQDAYRSVLFCFPGSEVPHWFPYRCRGNSVTLDPGSLNPINGDRLIGFALCVVLGSSEDQRNKDREFLFGLKFEYEGMHLLANNDLLRNYFYWKGKRIFKVHHTLVWKYTLESSAINYMLSRARNFNFEICEESHGVPTSNVVECGICPLYSKEKDNDFPAGDYWVHYKVCAPGH* 1257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g3943 1256 Pfam C-JID domain 1093 1235 IPR045344 -
Ahy13g3943 1256 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 153 IPR035897 -
Ahy13g3943 1256 SMART AAA_5 207 323 IPR003593 -
Ahy13g3943 1256 Pfam NB-ARC domain 191 387 IPR002182 GO:0043531
Ahy13g3943 1256 ProSiteProfiles TIR domain profile. 13 176 IPR000157 GO:0007165
Ahy13g3943 1256 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 10 693 - -
Ahy13g3943 1256 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 840 1160 - -
Ahy13g3943 1256 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 761 854 IPR044974 GO:0006952
Ahy13g3943 1256 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 840 1160 IPR044974 GO:0006952
Ahy13g3943 1256 Gene3D - 179 321 IPR027417 -
Ahy13g3943 1256 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 761 854 - -
Ahy13g3943 1256 PRINTS Disease resistance protein signature 1000 1016 - -
Ahy13g3943 1256 PRINTS Disease resistance protein signature 356 370 - -
Ahy13g3943 1256 PRINTS Disease resistance protein signature 210 225 - -
Ahy13g3943 1256 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 181 415 IPR027417 -
Ahy13g3943 1256 Gene3D Ribonuclease Inhibitor 478 699 IPR032675 -
Ahy13g3943 1256 Gene3D Ribonuclease Inhibitor 887 1067 IPR032675 -
Ahy13g3943 1256 SUPERFAMILY RNI-like 560 823 - -
Ahy13g3943 1256 Pfam Leucine Rich Repeat 581 600 IPR011713 -
Ahy13g3943 1256 Gene3D - 322 405 IPR042197 -
Ahy13g3943 1256 Gene3D Ribonuclease Inhibitor 747 886 IPR032675 -
Ahy13g3943 1256 SUPERFAMILY "Winged helix" DNA-binding domain 392 497 IPR036390 -
Ahy13g3943 1256 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 10 693 IPR044974 GO:0006952
Ahy13g3943 1256 Gene3D - 11 178 IPR035897 -
Ahy13g3943 1256 Pfam TIR domain 14 188 IPR000157 GO:0007165
Ahy13g3943 1256 SUPERFAMILY L domain-like 759 1034 - -
Ahy13g3943 1256 SMART till_3 14 150 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g3943 Ahy-Chr13 138828792 138833997 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g3943 767 937 WRKY Transcription Factor Family AT4G12020 33.140 1.34e-14 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g3943 - - adu:107481402 1320.84