Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g3933 ATGCCATCGGTGACATGGGGTGTGATTCAAGGTCGCAAGGAGAAGCTGGTATCGCGGGTCATCGTATTCGACTTCCTCAGGGGTTTGGGAATCGTCCCTGACGAGTTGCAGGACCTTAAGCTACCTTCGACAGTTGAAGTCATAAGGGAGCGCGTGGAGTTCCTCCAGAAACTAGGGATAACAATTGATGACATCAATGATTACCCTTTGATGTTGGGATGCAGTGTGAGGAAGAACATGATTCCTATTTTGGGGTACTTGGAAAAAATTGGGATTTCAAGATCCAAACTTGGGGGATTCATTAAGAGCTACCCGCAGGTATTGCATGCTAGTGTGATTGTTGAACTTGTCCCTGTTGTGAAGTTCCTTAGGGGACTTGATGTGGAGAGGGAGGATATTGGGTATGTGTTGCAGAAGTACCCTAAACTTCTAGGGTTCAAGCTTGAGGGTACTATGAGTACATCAGTGGCTTATCTTGTTAATATTGGGGTTAATCCTAGGGATATTGGTCCCATGGTGACTCAGTATCCTTATTTTTTGGGGATGAGAGTTGGGACTGTGATCAAGCCTTTTATTGATTACTTAGTCTCTTTGGGACTGCCAAAGAAGATTTTGGCTAAGATGTTGGAGAAGAGGGCCTATTTGCTTGGATATGATCTTGAAGAGACTATCAAGCCAAATGTGGATTGTTTGATTAGCTTTGGGATAGGGAGGGAGTGTTTGCCTTCGGTTATTGCACAGTATCCTCAGATTCTTGGATTGCCCCTCAAGACCAAGTTGTCTTCGCAGCAGTACTTCTTCAGTTTAAAGCTTAAGATTGATCCTGAAGATTTTGCGTGA 840 0.4429 MPSVTWGVIQGRKEKLVSRVIVFDFLRGLGIVPDELQDLKLPSTVEVIRERVEFLQKLGITIDDINDYPLMLGCSVRKNMIPILGYLEKIGISRSKLGGFIKSYPQVLHASVIVELVPVVKFLRGLDVEREDIGYVLQKYPKLLGFKLEGTMSTSVAYLVNIGVNPRDIGPMVTQYPYFLGMRVGTVIKPFIDYLVSLGLPKKILAKMLEKRAYLLGYDLEETIKPNVDCLISFGIGRECLPSVIAQYPQILGLPLKTKLSSQQYFFSLKLKIDPEDFA* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g3933 279 PANTHER EXPRESSED PROTEIN 1 273 - -
Ahy13g3933 279 Pfam mTERF 84 278 IPR003690 GO:0003690|GO:0006355
Ahy13g3933 279 Gene3D Transcription termination factor 3, mitochondrial 52 190 IPR038538 -
Ahy13g3933 279 Gene3D Transcription termination factor 3, mitochondrial 191 279 IPR038538 -
Ahy13g3933 279 PANTHER CGI-12 PROTEIN-RELATED 1 273 IPR003690 GO:0003690|GO:0006355
Ahy13g3933 279 SMART mt_12 33 61 IPR003690 GO:0003690|GO:0006355
Ahy13g3933 279 SMART mt_12 206 237 IPR003690 GO:0003690|GO:0006355
Ahy13g3933 279 SMART mt_12 134 165 IPR003690 GO:0003690|GO:0006355
Ahy13g3933 279 SMART mt_12 62 93 IPR003690 GO:0003690|GO:0006355
Ahy13g3933 279 SMART mt_12 98 129 IPR003690 GO:0003690|GO:0006355
Ahy13g3933 279 SMART mt_12 170 201 IPR003690 GO:0003690|GO:0006355
Ahy13g3933 279 SMART mt_12 242 274 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g3933 Ahy-Chr13 138724520 138725999 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Ahy13g3933 mTERF 1.70E-56 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g3933 K15032 - gmx:100809590 504.982