Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g3898 ATGGATCGCCCGCCGTCGCAACGACCACAAACACCTTTCACTCCTCCGATGCCGCGCCAACCTGATTCCACCTCCTCGATTCTCGTCCCCTTCCTCATCTTCCTCGCCATTGTCGCCATGGTTCTGGTTCCTTCGGGATCACCATCCTTCAAAAATTCATTATCCATTCTGCACCAAGTTCCGGAAGGGCATGTGGGAGTATATTGGAGGGGAGGTGCCCTTTTGAAAACCATTTCGGATCCAGGTTTCCATCTAAAAATGCCTTTCATAACTCAGTATGAACCTGTACAAGTGACACTTCAGACAGATATGGTGACAGATATACCATGTGGTACTAAAGGTGGTGTCATGATTAATTTTGGGAAGATCGAGGTTGTTAACCGACTCAGCAAAGAATTTGTCTATGAGACATTGCTCAATTATGGTGTGGAGTATGATAAGACATGGATATATGATAAAATTCATCATGAGATTAATCAGTTCTGCAGCTCTCACAGTCTTCAACAAGTCTATATAGATGTGTTTGATCAGATTGATGAAAAGATGAAAGATGCTCTTCAAGTTGACTGCACCCGCTATGCTCCGGGTATTGAGATCATCAGTGTCCGTGTAACAAAACCCACAATTCCGGATAGCATAAGACGAAACTTCGAACAAATGGAAGAGGAGCGTACTAAGGTCTTAATTGCTATTGAGAAGCAGAAAGTAGCTGAGAAGGAGGCAGAGACAATGAAGAAGATGGCTATTAGTGAGGCTGAGAAGAATGCTAATGTTAGCAGGATCCTTATGGAGCAAAAGTTGTTGGAAAAGGATAGTGCTAGAAGACAAGAAGAAATCGAGAATGCAATGTACCTGGCACGTGAAAAGAGTCTTGCAGATGCAGATTTCTACCGTGTAACAAAGGAAGCTGAAGCAAACAAGTTGAAGCTTACCCCTGAATTTCTTGAGCTTAAGTTTATCGAGTCCATTGCTAATAATACGAAGATTTTCTTTGGAGACAAGGTTCCAAACATGATTTTGGATCAGAGGGTATTTGGAAACTACCTTCAAGAAGTTTCTAGAGGGGCAGCTAAGATGGTCAAGGTCGATGCGTAA 1095 0.4283 MDRPPSQRPQTPFTPPMPRQPDSTSSILVPFLIFLAIVAMVLVPSGSPSFKNSLSILHQVPEGHVGVYWRGGALLKTISDPGFHLKMPFITQYEPVQVTLQTDMVTDIPCGTKGGVMINFGKIEVVNRLSKEFVYETLLNYGVEYDKTWIYDKIHHEINQFCSSHSLQQVYIDVFDQIDEKMKDALQVDCTRYAPGIEIISVRVTKPTIPDSIRRNFEQMEEERTKVLIAIEKQKVAEKEAETMKKMAISEAEKNANVSRILMEQKLLEKDSARRQEEIENAMYLAREKSLADADFYRVTKEAEANKLKLTPEFLELKFIESIANNTKIFFGDKVPNMILDQRVFGNYLQEVSRGAAKMVKVDA* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g3898 364 MobiDBLite consensus disorder prediction 1 19 - -
Ahy13g3898 364 Pfam SPFH domain / Band 7 family 59 241 IPR001107 -
Ahy13g3898 364 PANTHER ERLIN (ER LIPID RAFT ASSOCIATED PROTEIN) HOMOLOG 26 355 - -
Ahy13g3898 364 Gene3D Band 7 domain 84 222 IPR036013 -
Ahy13g3898 364 PANTHER ERLIN (ER LIPID RAFT ASSOCIATED PROTEIN) HOMOLOG 26 355 IPR033294 GO:0005783|GO:0031625
Ahy13g3898 364 SMART PHB_4 55 221 IPR001107 -
Ahy13g3898 364 MobiDBLite consensus disorder prediction 1 22 - -
Ahy13g3898 364 CDD SPFH_like_u3 53 342 IPR033294 GO:0005783|GO:0031625
Ahy13g3898 364 SUPERFAMILY Band 7/SPFH domain 87 224 IPR036013 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g3898 Ahy-Chr13 138454915 138457972 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g3898 K23341 - gmx:100797312 615.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g3898 13 138454915 138457972 Ahy13g3898 13 138454915 138457972 ECH