Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g3897 ATGATGGGTGCTTTATCATTGGCATATCCATTCAGCAGAGTCACAGCCACCAAAGTAAGTGAAGCTCAAGCTAAACCTAACAATGGCTTCCCTTCGTTTCTTCCGAAGCAAGTTCACACAATCAAAGACCCCTTTGCTCGAAACCTCGCCATGCGTATTCACCGGCTACCCGTTTCTGTTAAGTTCTCAGAGAATCCTATCATGAGTAGTTGTGTGAAGCCATTAATGATACAGAACAAGGCAAATCCAGTTGTCCTTCTTCATGGTTTCGACAGCTCATGTTTAGAATGGAGATATACATTTCCATTGCTTGAGGAGGCTGGTTTTGAGACATGGGCCTTTGACATTCTCGGTTGGGGATTCTCCGATCTAGAAAAACTTACTTCATGTGATGTGGTATCAAAGCGCGAACACTTCTATGAGTTTTGGAAGTCTTACATCAAAAGGCCAATGATATTGGTTGGACCAAGCCTTGGCTCAGCTGTCGCCATTGATTTTGCAGTCAATTATCCGGAAGCTGTGGAAAAGCTTGTTTTGATTGATGCTAGTGTATATACAGAGGGAACAGGAAACCTAGCAACCTTACCTAGACTTATAGCCTATGCCGGGGCATATGTATTGAAGAGTGTTCCATTACGGTTGTATGCAAACTATTTGACGTTCAATGACATTTCTTTCAGTACCAGCCTTGATTGGACTAATATCGGCCGCTTGCATTGTTTGTTTCCATGGTGGGAGGATGCTACAGTGGATTTTATGATTAGTGGTGGTTATAATGTTGTTTCCCAGATAAGAAAGGTAAAGCAGAAAACACTTATCATTTGGGGAGAGAATGACCGGATCATCAGCAATAAGCTTGCTGTGCAACTGCACTGTGAGTTATCTGATGCAATTATACGCCAAATACCAGATTGCGGCCACCTTCCACATGTCGAAAGACCGGCTTCTGTCGTCAAATTCATTATTGAGTTTGTTCAGAGAGAAACCAAGTTAGTAAATCAATGTGTTTCAGCAGAATGA 1020 0.4235 MMGALSLAYPFSRVTATKVSEAQAKPNNGFPSFLPKQVHTIKDPFARNLAMRIHRLPVSVKFSENPIMSSCVKPLMIQNKANPVVLLHGFDSSCLEWRYTFPLLEEAGFETWAFDILGWGFSDLEKLTSCDVVSKREHFYEFWKSYIKRPMILVGPSLGSAVAIDFAVNYPEAVEKLVLIDASVYTEGTGNLATLPRLIAYAGAYVLKSVPLRLYANYLTFNDISFSTSLDWTNIGRLHCLFPWWEDATVDFMISGGYNVVSQIRKVKQKTLIIWGENDRIISNKLAVQLHCELSDAIIRQIPDCGHLPHVERPASVVKFIIEFVQRETKLVNQCVSAE* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g3897 339 Gene3D alpha/beta hydrolase 75 333 IPR029058 -
Ahy13g3897 339 PRINTS Alpha/beta hydrolase fold signature 153 166 IPR000073 -
Ahy13g3897 339 PRINTS Alpha/beta hydrolase fold signature 108 123 IPR000073 -
Ahy13g3897 339 PRINTS Alpha/beta hydrolase fold signature 167 180 IPR000073 -
Ahy13g3897 339 PRINTS Alpha/beta hydrolase fold signature 271 285 IPR000073 -
Ahy13g3897 339 SUPERFAMILY alpha/beta-Hydrolases 80 326 IPR029058 -
Ahy13g3897 339 PANTHER HYDROLASE 14 337 - -
Ahy13g3897 339 PANTHER ALPHA/BETA FOLD HYDROLASE 14 337 - -
Ahy13g3897 339 Pfam Alpha/beta hydrolase family 84 319 IPR000073 -
Ahy13g3897 339 PRINTS Epoxide hydrolase signature 88 106 IPR000639 GO:0003824
Ahy13g3897 339 PRINTS Epoxide hydrolase signature 108 123 IPR000639 GO:0003824
Ahy13g3897 339 PRINTS Epoxide hydrolase signature 302 324 IPR000639 GO:0003824
Ahy13g3897 339 PRINTS Epoxide hydrolase signature 167 180 IPR000639 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g3897 Ahy-Chr13 138450557 138454654 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g3897 76 327 Miscellaneous Gene Families AT1G52750 23.656 5.06e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g3897 - - gmx:100814882 563.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g3897 13 138450557 138454654 Ahy13g3897 13 138450557 138454654 ECH