Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g3866 ATGGCTACTTTGTTCTCAGTGTGTTCGGGTTCATCTGCTTTTCTGTCTCCATGCACTTCACACACCAGGTGCTTGTCTCTTTTACCCAAAGGATCACCACTTCTTCACCACATCAAGAAACCTTTTTCTGTGAAATCCCTTTCTTCTTTGGAAACTCAAGAAGTATCATCAGTATCAGTGTCACCAGCAGTTACCACCTTCTGGCAATGGCTTAAGGAAGAAGGTGTTATCTCTTCAAAGACACCAGTGAAACCTGGTGTGGTCCCTGAAGGCCTTGGACTTGTTGCAACCAAAGACATATCAAGAAACGAGGTTGTTCTTCAGGTTCCAAAGAGGTTTTGGATTAACCCAGATGCAGTTGCTGCTTCTGAGATTGGGAATGTGTGTAGTGGTCTCAAGCCATGGCTTTCTGTTGCTTTGTTCCTCATTAGGGAGAGGTCAAGGGATGATTCACTTTGGAAGCACTACTTCCCTGTTCTGCCAAAAGAAACTGATTCTACTATATACTGGTCAGAGGAGGAGCTCTCAGAGATTCAAGGTACTCAACTTCTGAACACAACATTGGGTGTGAAAGAGTATGTGCAGAATGAAATTATGAGACTGCAAGAAGAAATCATACTCCCTAACAAGAAGCTTTTTCCTTTTCCTATAACACTGGATGACTTCTTCTGGGCATTTGGAATTCTCAGATCAAGGGCATTTTCTAGACTTCGCAATGAAAATTTGGTTGTTATTCCACTAGCAGACTTGATAAACCACAGTGCAAGAGTAACTACAGAAGATCATGCTTATGAAGTTAAAGGAGCTGCAGGCCTTTTCTCTTGGGATTACTTATTTTCCCTAAGAAGCCCCCTTTCTGTCAAGGCTGGGGAACAGATATATATCCAATATGATTTGAACAAAAGCAACGCCGAGTTGGCTCTGGACTATGGCTTCATCGAACCAAATTCTGACCGTAATGCATATACCTTGACACTTGGAATACCCGAGTCCGACCCTTTCTATGATGACAAACTAGACATTGCAGAGACCAATGGTTTTGGTGAGACAGCATACTTTGACATATTCTACAACCAACCACTTCCACCAGGGATGATTCCATACCTGAGACTTGTAGCTCTAGGAGGTACTGATGCTTTCCTACTGGAAGCGCTATTCAGAAACACTGTCTGGAGTCATCTAGAATTGCCAGTGAGCCGTGACAATGAGGAACTTTTATGCAGGGTTGTTAGAGAGGCCTGCAAATCTGCTCTTGCTGGTTATCATACAACCATTGAAGAGGATAACAAGTTAAAGGAAGCAAAATTAGATTCAAGACTTGCAATAGCAGTCGGAATAAGAGAAGGGGAGAAGAAAGTTCTGCAACAAATTGATGAGGTCTTCAAGGAGAAAGAATCGGAACTGGACCAGTTAGAGTATTACCAAGAAAGGAGGCTCAAGGACCTTGGCCTCTGCGGCGAAAGTGGTGATATACTAGGGGACCTTGAGAAGTTCATGTAA 1500 0.43 MATLFSVCSGSSAFLSPCTSHTRCLSLLPKGSPLLHHIKKPFSVKSLSSLETQEVSSVSVSPAVTTFWQWLKEEGVISSKTPVKPGVVPEGLGLVATKDISRNEVVLQVPKRFWINPDAVAASEIGNVCSGLKPWLSVALFLIRERSRDDSLWKHYFPVLPKETDSTIYWSEEELSEIQGTQLLNTTLGVKEYVQNEIMRLQEEIILPNKKLFPFPITLDDFFWAFGILRSRAFSRLRNENLVVIPLADLINHSARVTTEDHAYEVKGAAGLFSWDYLFSLRSPLSVKAGEQIYIQYDLNKSNAELALDYGFIEPNSDRNAYTLTLGIPESDPFYDDKLDIAETNGFGETAYFDIFYNQPLPPGMIPYLRLVALGGTDAFLLEALFRNTVWSHLELPVSRDNEELLCRVVREACKSALAGYHTTIEEDNKLKEAKLDSRLAIAVGIREGEKKVLQQIDEVFKEKESELDQLEYYQERRLKDLGLCGESGDILGDLEKFM* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g3866 499 PANTHER [FRUCTOSE-BISPHOSPHATE ALDOLASE]-LYSINE N-METHYLTRANSFERASE, CHLOROPLASTIC 44 491 - -
Ahy13g3866 499 SMART set_7 79 304 IPR001214 GO:0005515
Ahy13g3866 499 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 44 491 - -
Ahy13g3866 499 Pfam SET domain 91 297 IPR001214 GO:0005515
Ahy13g3866 499 ProSiteProfiles SET domain profile. 74 298 IPR001214 GO:0005515
Ahy13g3866 499 SUPERFAMILY SET domain 61 319 IPR046341 -
Ahy13g3866 499 Gene3D - 314 478 IPR036464 -
Ahy13g3866 499 SUPERFAMILY RuBisCo LSMT C-terminal, substrate-binding domain 321 492 IPR036464 -
Ahy13g3866 499 PIRSF RMT_SET 1 498 IPR011192 GO:0009507|GO:0030785
Ahy13g3866 499 ProSiteProfiles Plant LSMT protein-lysine methyltransferase family profile. 37 497 IPR011192 GO:0009507|GO:0030785
Ahy13g3866 499 CDD SET_RBCMT 75 313 IPR044431 GO:0016279|GO:0018022
Ahy13g3866 499 Pfam Rubisco LSMT substrate-binding 329 454 IPR015353 -
Ahy13g3866 499 Gene3D set domain protein methyltransferase, domain 1 60 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g3866 Ahy-Chr13 138154342 138157363 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g3866 58 253 NAC Transcription Factor Family AT3G56570 27.094 1.03e-07 52.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Ahy13g3866 SET 3.00E-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g3866 K00592 - gmx:100818113 823.928
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g3866 13 138154342 138157363 Ahy3g3595 3 135280398 135283449 hybridization