Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g3848 ATGGCTTCAACAAAGTTGCCTTCAGGTGCAAGCAAGAAGTTCAAGCCTACAGATGAAGAACTCATTCAAGATTTTCTTCTTAACAAAATCAATGGGAGGCCTCTACCAAACAATGGAACCATTCTTGAAGGTGAATTGTTTGGTACGGAGAAGAATCCATGGGAAATTTGGGAAGAAAACGTTGAAAATTCTTATGACGGGAAGGACCTCTATTTTTTCACTACTCTGAAAAGGAAGTTCTCAACTAACAGCTTGCGGATGGTTCGCACCATTGGGTTGGGTTCTTGGGAAGGTGAAGACATCGGAAAAGAGATTATGGCCAATAAAACTAACCAGCGCATTGGAATGAGGAAACGATATCGCTTTGAGAAGAGTGGTACTAGCCATGATGGTGGATGGATCTTGCATCAATATAGCATTGATTCTTCTTTGTTACCAAATCCATCCAATATGAATAATTATGTTTTATGCAGATTTAGAAAGAATAACAGTAAACCTCGTCAAAAGAAAAGGAAAATTGTGGCTCCTAAAACTGTGGCTACTGTAATACCGAATGCCAATGATTATGCTGGGAAAGTAGAATTTGTTAACCAATCAGAGAATGGAGATGAAAGGATGGAGATTCAAAATGAATCACCAAACCAATCAGACAAAGCAAACCAATCAGAGAATAATGGAGATGAGAAGATTGATGAGATTCAGAGAGAACTAACAAATCAATTAGAGAATAATGAGGATGAAATACAGGTTGAGGCTTTTGATACTACTATTGGAATTGAGGCAAACTGTGAGGAAAAGGGAGATGATGATGATGAAGATGACAATGATATGACATGGCCAGAGTATTTTGCAATGCAATTGTTAGAACTTAACAAAGACTGGTTCATCCCAAAGGATGATGTCCCCATTATTCCAAATAAATTTCACAATGACATGTTAAAGCGGTTTAAAAAGGTTTTATGA 963 0.3749 MASTKLPSGASKKFKPTDEELIQDFLLNKINGRPLPNNGTILEGELFGTEKNPWEIWEENVENSYDGKDLYFFTTLKRKFSTNSLRMVRTIGLGSWEGEDIGKEIMANKTNQRIGMRKRYRFEKSGTSHDGGWILHQYSIDSSLLPNPSNMNNYVLCRFRKNNSKPRQKKRKIVAPKTVATVIPNANDYAGKVEFVNQSENGDERMEIQNESPNQSDKANQSENNGDEKIDEIQRELTNQLENNEDEIQVEAFDTTIGIEANCEEKGDDDDEDDNDMTWPEYFAMQLLELNKDWFIPKDDVPIIPNKFHNDMLKRFKKVL* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g3848 320 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 13 256 - -
Ahy13g3848 320 SUPERFAMILY NAC domain 12 161 IPR036093 GO:0003677|GO:0006355
Ahy13g3848 320 ProSiteProfiles NAC domain profile. 8 162 IPR003441 GO:0003677|GO:0006355
Ahy13g3848 320 Coils Coil 230 250 - -
Ahy13g3848 320 Pfam No apical meristem (NAM) protein 13 140 IPR003441 GO:0003677|GO:0006355
Ahy13g3848 320 Gene3D NAC domain 17 167 IPR036093 GO:0003677|GO:0006355
Ahy13g3848 320 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 13 256 - -
Ahy13g3848 320 MobiDBLite consensus disorder prediction 203 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g3848 Ahy-Chr13 137845136 137848474 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g3848 5 159 NAC Transcription Factor Family AT5G13180 33.758 8.23e-17 77.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Ahy13g3848 NAM 6.40E-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g3848 - - ahf:112730219 640.188