Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g3837 ATGGAAGGTGAGAAGCTTGATGAGATCATGTTACCAGGTTTCAGGTTCCACCCAACTGATGAGGAGCTTGTGGGGTTCTACCTTAAGAGAAAGATTCAGCAAATGCCTCTGTCCATTGAGCTCATCAAGCAACTTGATATCTATAAATATGATCCTTGGGATCTTCCAAAAGTGGCAGGTACAGGAGAGAAAGAGTGGTATTTCTACTGTCCAAGAGACAGAAAATACAGGAACAGTGCAAGGCCAAATAGGGTAACTGGAGCTGGGTTCTGGAAAGCCACAGGGACTGACAGGCCTATATACTCCTCAGAGGGTTCAAAGTGCATTGGACTCAAGAAATCTTTGGTCTTCTACAAAGGCAGAGCTGCCAAAGGTGTTAAAACTGATTGGATGATGCATGAGTTTAGGCTCCCTTCTCTTGCTGACTCTTCATCCGACAAGACCACTATTCCTCCTAATGACTCTTGGGCAATCTGCAGAATATTCAAGAAAACAAATGCTACAGCTCAAAGAGCACTCTCTCACTCTTGGGTTTCTACCTTACCTGAAACACCAACCACCACTACCAATGATACAGATCACATATTCCACTTTTGTTCATCCAACATGCCAACAATGATGGCAAAGAAAACTAGCTTCATGACCCAGTTTTGCACTAACTACACTAGTGACACACAAATCCAAGATGTTGCATCATCTTATAAACCACCCTTCATTAATATTAATCCATTGCTTTACAAACACTTTGATCATCATCATCATCAGTTACCACCCATTATTTCAAATGGAGATCTTATAAGCAACGACTGTTTAATACCCTCTTCTACTACTACTCCACTTGAAACATCCTCTAATAGTGCAAAACCTACTATGGATTTTTCTTCATTGTTGCTGAACATGTCATCTTCTGTTCTTGGAGATTTTGCTGGAAAGACATCATCGTCGTCCTCATCCCAAGAGGGTACAGCAGCAACAGCAACAACAATCACAAGTAGCTTCGGTGGTGGAATGCAGGAGCACTACCCAACAATACCATTACTGCGTCAGATGCATCAAGGGAACAACAACAACAACATTGGCATCAACAACAACAACGTGTCTGCTGGCGGTGAAGAACAAGAGTTGGAGAAAGTTGGATCCATTGTTGGGTTCCCATTCATGAACATTGGGGATGCATGGAAGTCAAATATGCTTTGGGATACTTCTTGTCCCTTGTGA 1218 0.4236 MEGEKLDEIMLPGFRFHPTDEELVGFYLKRKIQQMPLSIELIKQLDIYKYDPWDLPKVAGTGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSEGSKCIGLKKSLVFYKGRAAKGVKTDWMMHEFRLPSLADSSSDKTTIPPNDSWAICRIFKKTNATAQRALSHSWVSTLPETPTTTTNDTDHIFHFCSSNMPTMMAKKTSFMTQFCTNYTSDTQIQDVASSYKPPFININPLLYKHFDHHHHQLPPIISNGDLISNDCLIPSSTTTPLETSSNSAKPTMDFSSLLLNMSSSVLGDFAGKTSSSSSSQEGTAATATTITSSFGGGMQEHYPTIPLLRQMHQGNNNNNIGINNNNVSAGGEEQELEKVGSIVGFPFMNIGDAWKSNMLWDTSCPL* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g3837 405 MobiDBLite consensus disorder prediction 309 336 - -
Ahy13g3837 405 Pfam No apical meristem (NAM) protein 12 137 IPR003441 GO:0003677|GO:0006355
Ahy13g3837 405 PANTHER PROTEIN FEZ ISOFORM X1 2 403 - -
Ahy13g3837 405 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 2 403 - -
Ahy13g3837 405 Gene3D NAC domain 19 169 IPR036093 GO:0003677|GO:0006355
Ahy13g3837 405 SUPERFAMILY NAC domain 10 164 IPR036093 GO:0003677|GO:0006355
Ahy13g3837 405 ProSiteProfiles NAC domain profile. 10 164 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g3837 Ahy-Chr13 137702206 137704060 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g3837 4 203 NAC Transcription Factor Family AT1G26870 74.038 1.98e-106 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Ahy13g3837 NAM 6.80E-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g3837 - - gmx:100815365 444.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g3837 13 137702206 137704060 Ahy13g3837 13 137702206 137704060 ECH
Ahy13g3837 13 137702206 137704060 Ahy3g3570 3 134841007 134843085 hybridization