Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g3818 ATGAGTGAGAAAACGATCATGGAGCCTGACCACCATCAAAATGGGATCCGCACCAGACCTAATTTTCCACTCCAACTCTTAGACAATAAGAAAGATGATCTTCAGCAGCCGCCGCCATCAGAGGATGGACCCGCCGCTGCTGCCAAGAAGCTGCCGCCAAAGCGAGCTTCCACAAAAGACAGGCACACCAAGGTCGACGGTCGCGGCCGACGCATCCGTATGCCGGCTGCAGCCGCTGCCAGGGTGTTCCAGCTGACGCGAGAGCTCGGCCACAAGTCTGACGGGGAGACCATCGAGTGGCTCCTCCAACAGGCTGAGCCCTCCGTCATCGCCGCCACCGGAACCGGTACTATCCCTGCAAATTTCACTTCCCTCAACATCACGCTTAGAAGCTCAGGATCCACCATCTCTTCCCCCTCTCACTACTTCAGAGGCGCCACCGCCACCGCTACACCGTACCTTAGCCACGCAGCCAGCTTCTCCGCCGCTAGGAGCCGCAGCGAATGGGTGAGGAACGTGGCGGTGGAAGATTATTCTAGAAGACTCATGTTCTCCGGCAGTGACAATAGTAATAATAATAACAACAACTCTGCTGTCTTGAATTTCAACAACGCTGTTAATGATATTATGCAAAGCAAGCAAGAGGCTCGGGAAGAGCCCTGTAGCGGTGACGGTGGCGGCGGAGGAGATGCTTTGGGGAGGAAGAGAAGGCAAGAGGAGGTGTTCTCACAGCACCAGGGTACTCAGATGATGGGTAGCTACTTGTTACAGTCGAGTTCAGGGTCAATTCCGGCGACTCATGCTTCTATTCCGGCGACTTTTTGGATGATGGGCGGCGGTGGAGTTGGTGGTGGCAGTGGTAATAATGGCGGTGACCCAATTTGGGCAATTCCAACGGTTGGTAACAATAGTAGCATGTATAAAGGGGCTATGTCTGGTGGCAGCGGCAACGGTGCCGGCGGCATTCATTTCATGAATTTTGCTTCTCCAATGGCTCTATTGCAAGCTCAACAACTAGGAGGAGGAGGAGGAGGAGGAGGCGGCGGCAGTGCAGTGCTGAGTGAAAGTAACCTGGGAATGCTTGCAGCTCTTAATGCATACAGGCCTATTATGGCTAACGGCAGCGGCGGCCAACATTCACCCCATGGAGATGGAGGTGATCAACAAAGTCAACCCTGA 1179 0.5428 MSEKTIMEPDHHQNGIRTRPNFPLQLLDNKKDDLQQPPPSEDGPAAAAKKLPPKRASTKDRHTKVDGRGRRIRMPAAAAARVFQLTRELGHKSDGETIEWLLQQAEPSVIAATGTGTIPANFTSLNITLRSSGSTISSPSHYFRGATATATPYLSHAASFSAARSRSEWVRNVAVEDYSRRLMFSGSDNSNNNNNNSAVLNFNNAVNDIMQSKQEAREEPCSGDGGGGGDALGRKRRQEEVFSQHQGTQMMGSYLLQSSSGSIPATHASIPATFWMMGGGGVGGGSGNNGGDPIWAIPTVGNNSSMYKGAMSGGSGNGAGGIHFMNFASPMALLQAQQLGGGGGGGGGGSAVLSESNLGMLAALNAYRPIMANGSGGQHSPHGDGGDQQSQP* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g3818 392 MobiDBLite consensus disorder prediction 213 239 - -
Ahy13g3818 392 Pfam TCP family transcription factor 57 204 IPR017887 -
Ahy13g3818 392 MobiDBLite consensus disorder prediction 1 15 - -
Ahy13g3818 392 PANTHER TCP FAMILY TRANSCRIPTION FACTOR 46 389 - -
Ahy13g3818 392 ProSiteProfiles TCP domain profile. 58 112 IPR017887 -
Ahy13g3818 392 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 46 389 IPR005333 GO:0003700
Ahy13g3818 392 MobiDBLite consensus disorder prediction 1 66 - -
Ahy13g3818 392 MobiDBLite consensus disorder prediction 372 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g3818 Ahy-Chr13 137473822 137475650 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g3818 41 338 TCP Transcription Factor Family AT3G47620 46.246 1.03e-57 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Ahy13g3818 TCP 1.00E-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g3818 - - aip:107633962 624.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g3818 13 137473822 137475650 Ahy13g3818 13 137473822 137475650 ECH