Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g3807 ATGAAGAAACAGGAAGAACAGTGTAACAGAGAATCTAAGAAGAAGGGTCACATTGTAACTTGGACTCAAGAGGAAGATGATATACTGAGAGAGCAGATTGGTATCCATGGAACTGAAAAATGGTACACTTACTTGAATTCTGATTTCAAGAAAGGTGGATGGTCACCAGAGGAAGACTTGCTCTTATGTGAGGCTCAAAAATTATATGGCAACAGATGGACAGAAATAGCGAAAGTGGTTTCAGGAAGAACGGATAATGCTGTGAAAAATCGCTTCTCTACGCTCTGCAGAAAGAGGCAAAAATATGAAGCTTTAGCTAAAGAGAACAGCATTTCATCACACATCAATTCAAATAACAAGAAAATTGTTTTCCAACATGCTTATAATACAGATGCAACATCAGAATCTGCTATATCTATCAAGAAAATGAGGAGGGCTCATATCACAGATGATGGAGGGAAGATCAAGTTTGGAGATAGATCACATTTGCGAAATGGAACTTCGATAAATCAGCATCCAAGGACACCATTCGCAGTATTAGCTCAAAACTCACAAAACATAAACAATTTGCTAGACGAGCTTCAAATTTGCAATGCCAAGTTTAGTAGTTCTGCTCAAAATAATAAAACTCAAGGAACATTCCTAAAAAGGGATGACCCAAAAATAGATGCATTAATGCAACAAGCAGAGTTGCTTAGCTCACTAGCTCAAAATATTGATACAGAGGACATGGACCAAAGTCTTGAAAACACGTGGAAGGTTCTTCAAGAGTTTTTGAACCGAACCAAAGAAGCAAACAACCCGAAATGCAAGATTCAAGGTTTAAAGCTTGCTGATCTTAAAAATATGGTTGAAGACTTGAGTAGTAACGAGGGAGGCCAGCCATGTTGGAGGCAAATGGATCTGTATGAAGACTCTCCAGCCAGTTCTGAATACAGTACAGGATCAACTATCCTCCCTCTCTCAGCTGGTGACATTATGGAACACTCTTCACACCGGGATATAGAAACTGAAATGAAAACCACACAAATTGAAGATAAGAAAGAAGCAGATGGATGTGAGAGAGGTGTTCTAGTTACTGCAACCCTGGATCAAGTAGATATGCTGCTGAATTCGGAAGAACAAATAAACAATGATAGCGCTGTTTCTGCCTCATCAAGAGTGGAGTTTGGTTCCCCTGTTCAAGTAACTCCGATATTCAGATCTTTGGCTGCAGGGATTCCCAGCCCAGAATTTTCGGAAAGTGAAAGGAACTTCTTAAGGAAAACACTAGGAGTGGAGTCTCCATCTCTCAACCCAAGTGCTCAACCATCACAACCGCCACCCTGCAAAAGAGCCCTACTAGACAGTTTACAATCCTAG 1362 0.4023 MKKQEEQCNRESKKKGHIVTWTQEEDDILREQIGIHGTEKWYTYLNSDFKKGGWSPEEDLLLCEAQKLYGNRWTEIAKVVSGRTDNAVKNRFSTLCRKRQKYEALAKENSISSHINSNNKKIVFQHAYNTDATSESAISIKKMRRAHITDDGGKIKFGDRSHLRNGTSINQHPRTPFAVLAQNSQNINNLLDELQICNAKFSSSAQNNKTQGTFLKRDDPKIDALMQQAELLSSLAQNIDTEDMDQSLENTWKVLQEFLNRTKEANNPKCKIQGLKLADLKNMVEDLSSNEGGQPCWRQMDLYEDSPASSEYSTGSTILPLSAGDIMEHSSHRDIETEMKTTQIEDKKEADGCERGVLVTATLDQVDMLLNSEEQINNDSAVSASSRVEFGSPVQVTPIFRSLAAGIPSPEFSESERNFLRKTLGVESPSLNPSAQPSQPPPCKRALLDSLQS* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g3807 453 SUPERFAMILY Homeodomain-like 39 104 IPR009057 -
Ahy13g3807 453 SMART sant 50 98 IPR001005 -
Ahy13g3807 453 ProSiteProfiles Myb-like domain profile. 46 96 IPR001005 -
Ahy13g3807 453 Pfam Myb-like DNA-binding domain 51 94 IPR001005 -
Ahy13g3807 453 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 46 100 IPR017930 -
Ahy13g3807 453 Coils Coil 180 200 - -
Ahy13g3807 453 Gene3D - 53 126 - -
Ahy13g3807 453 PANTHER TRANSCRIPTION FACTOR MYB88 11 41 - -
Ahy13g3807 453 PANTHER TRANSCRIPTION FACTOR MYB88 40 448 - -
Ahy13g3807 453 CDD SANT 54 95 IPR001005 -
Ahy13g3807 453 PANTHER MYB PROTEIN-RELATED 11 41 - -
Ahy13g3807 453 PANTHER MYB PROTEIN-RELATED 40 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g3807 Ahy-Chr13 137241648 137247099 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g3807 40 451 MYB Transcription Factor Family AT1G14350 50.721 6.09e-126 369
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Ahy13g3807 Myb_DNA-binding 6.80E-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g3807 K09422 - gmx:100807667 611.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g3807 13 137241648 137247099 Ahy13g3807 13 137241648 137247099 ECH