Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g3802 ATGATGGGAAGACAAAGTGCTAGAAAGTGGATTAGAAACTTAATTCTGGGCAAGAAATCATCATCGAAGTCTAATTCATCAAAACCTCAAGATGTTTTTAAACCTTCAAGTAACAAGGATATGGTGATGGTGGTGGTGTCTTCTGAGGCATCAATGTCTCCTCATCCAGCCCCTCCAAGTTCTTCAGCTAAAGCCATAACAAAAGGAATGGTACCAGAAAATGAGGTAGTTAATGGATCATCAAATGAAAAGCTTTTTGTTATTGCAAGTGAAGATGAACAGGCCAATGCACAAGCACAAGATGCTGTTGCTAATATTGGATCTGAGGATCATGCTGAGAAAATCAACCTTACAGAGGCAGCTATAATAGCTCAAGCAGCTCTTAGAGGCTATCAGGCACGCAGAAAGTTTGAGATACTGAAAGGGATGATACCCCTTCAAGCTCTTATTCGTGGCAAGTTGGCTCGAAGAGAAGCTGTTTCTGCTCTATACTGTGTTAAGGGAATAGTTAAAGTTCAAGCACTCGCTCGTGGTTATAAAGTTAGGCACTCTGCTATTGGTCTTCAAGTGCAGAAAACTCTTAAGGATACTAAATGTTCAAATTCTATTGGGAGAGTTACATCAACAAAGGCAGAGAAGATTTCAGATAGTGTCTTTGTTCACAAGCTTCTGGCATCGTCGCCGGCGGCTGTGCTTTCCAGACAACTCAGATATGAATGGCTTGAACGTTGGACGAGATCACGATTTTGGGCACCTCTTCAAGAATTGAAGAAAATTTATGAGAAAAATGTTTTAGGCCAAACAGTAGAAGCTGGTGAGGGAAAAGCCAAAAGAAATGCAAGGAAAGGAGAAGCTGTGAGGGTTGACAAGAAAAAGGAATCAAGCATGGCATTGCATTCATCAGTTAAGGAAAATGAGAAAAGAAAACAACACATGACAAGAATTGAGGATACTAATAATAGTAGTTTCCAGAGAAGAGCTTCACTTCCTGCTAATTATTATTTGAAGAATGATAAGAATAAGAATGAGTCATCACAAAACACTACTACTACTACTACTACTCCAAGAGTTCCAAGTTATATGGCTCCTACTGAGTCTGCAAAAGCTAAGCTAAACTCTCCAAGATTTGGTAGTGATTTGGTATTAGACAGAAATGGTATAAGCAGGAGGCTGTCACTTTCATTTTCACTTAATGGCAAGTTAGGAATGGCAAAGATAGATAACAGATCCCTCTCATCTTCAAGGGATTGGACAGTTTCAGATAAGTTGATCCAACCTCAGTGGAGAAGGTGA 1293 0.3975 MMGRQSARKWIRNLILGKKSSSKSNSSKPQDVFKPSSNKDMVMVVVSSEASMSPHPAPPSSSAKAITKGMVPENEVVNGSSNEKLFVIASEDEQANAQAQDAVANIGSEDHAEKINLTEAAIIAQAALRGYQARRKFEILKGMIPLQALIRGKLARREAVSALYCVKGIVKVQALARGYKVRHSAIGLQVQKTLKDTKCSNSIGRVTSTKAEKISDSVFVHKLLASSPAAVLSRQLRYEWLERWTRSRFWAPLQELKKIYEKNVLGQTVEAGEGKAKRNARKGEAVRVDKKKESSMALHSSVKENEKRKQHMTRIEDTNNSSFQRRASLPANYYLKNDKNKNESSQNTTTTTTTPRVPSYMAPTESAKAKLNSPRFGSDLVLDRNGISRRLSLSFSLNGKLGMAKIDNRSLSSSRDWTVSDKLIQPQWRR* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g3802 430 ProSiteProfiles IQ motif profile. 167 193 IPR000048 GO:0005515
Ahy13g3802 430 MobiDBLite consensus disorder prediction 274 315 - -
Ahy13g3802 430 PANTHER IQ-DOMAIN 5-RELATED 341 402 - -
Ahy13g3802 430 MobiDBLite consensus disorder prediction 17 34 - -
Ahy13g3802 430 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 2 311 - -
Ahy13g3802 430 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 341 402 - -
Ahy13g3802 430 Pfam IQ calmodulin-binding motif 167 183 IPR000048 GO:0005515
Ahy13g3802 430 Pfam IQ calmodulin-binding motif 118 137 IPR000048 GO:0005515
Ahy13g3802 430 Gene3D - 114 164 - -
Ahy13g3802 430 ProSiteProfiles IQ motif profile. 141 168 IPR000048 GO:0005515
Ahy13g3802 430 MobiDBLite consensus disorder prediction 272 360 - -
Ahy13g3802 430 ProSiteProfiles IQ motif profile. 117 145 IPR000048 GO:0005515
Ahy13g3802 430 MobiDBLite consensus disorder prediction 16 39 - -
Ahy13g3802 430 MobiDBLite consensus disorder prediction 335 360 - -
Ahy13g3802 430 Pfam Protein of unknown function (DUF4005) 342 400 IPR025064 -
Ahy13g3802 430 SMART iq_5 139 160 IPR000048 GO:0005515
Ahy13g3802 430 SMART iq_5 116 138 IPR000048 GO:0005515
Ahy13g3802 430 SMART iq_5 164 186 IPR000048 GO:0005515
Ahy13g3802 430 PANTHER IQ-DOMAIN 5-RELATED 2 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g3802 Ahy-Chr13 137190829 137193671 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g3802 112 308 IQD Protein Family AT1G18840 43.519 1.40e-36 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g3802 - - aip:107634789 773.852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g3802 13 137190829 137193671 Ahy13g3802 13 137190829 137193671 ECH
Ahy13g3802 13 137190829 137193671 Ahy11g1876 11 122391018 122396716 ECH