Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g3799 ATGGGAAAATTGGAAGTATTATTGAGAAATGGTGCAAATGATGAAGATTCATCATCATTAGTGCAAAAGGAGTACTTGTTTGACATTATCCTTCAACAACAAAAGCAAGAAGCTACCACCAAAGAAGGCATCAATAATAATAATGAAGATAGTGATGAAGAACTTGTGTCACTCTCTCTAGGAGTCTCATCATCAGCTTCCAATAATAGAGAGGAAAAACTACTCACCGAGATGTGGCCACCGAGTAAAGTTCTGAAGACAACAAAAAATAATGGCGAAGGAAATGAAGCATCTCATCATCATCACCATAATACTCGCCTCAAGAAGACTAGGGTTTCTATAAGAGCCAGATGTGATACACAAACGATGAATGATGGATGCCAATGGAGAAAATATGGACAGAAGATAGCAAAAGGAAATCCATGTCCTCGTTCATACTACCGATGCACTGTCTCTTCATCTTGTCCCGTAAGAAAACAGGTTCAAAGATGTGCTCAAGACATGTCAATCCTGATTACAACCTATGAAGGAACTCACAACCATCCACTTCCTTCTTCAGCCACTCCAATGGCGTCTGCAACTTCAGCCGCCGCTTCCGTTCTTCAATCTTCCTCCTTGTCCTCCTCCTCGTCACAACAAGGCCTTGTACCCAATTCAGAAACAACAACCATTATCAACCCTAATAATAATACTACCCTAATAAGACCACAACAATTCTACTTGTTCAACTCTTCCATGATCTCAAATAATAACTTTCACCCCACAATAACTCTTGACCTCATTACTAAACCTCCAACTTCATCATCATCTTCCATACCAAAGTATTCACCAACAAATCTTGATTTTTCCTCAACTACTACCACTTTCTCTCCATTGCAGTATAGCACTCAAGACTCATCATCGTCTCGTTATTATTGGAACCTTAATAATAATAAGAATGGAAAGCAACCACTGATTCAATATCATCAAGGGAATTATTATCCCTACCAACAAAATTGCATGCCCATTATTTTTCAACAACCTTTACATGCAGATTGTTATGCATCCTCTGCTCTTAATAATAACCAACAAGGAAACATCACATTCTCATTGTTAACCTCACAACCGTCTAAAGGTTCATATGCTTCGCCGCCCTCTAAGAAAAGTTACCAGTTCTTGGAGAAAAGGAAGTGA 1173 0.3887 MGKLEVLLRNGANDEDSSSLVQKEYLFDIILQQQKQEATTKEGINNNNEDSDEELVSLSLGVSSSASNNREEKLLTEMWPPSKVLKTTKNNGEGNEASHHHHHNTRLKKTRVSIRARCDTQTMNDGCQWRKYGQKIAKGNPCPRSYYRCTVSSSCPVRKQVQRCAQDMSILITTYEGTHNHPLPSSATPMASATSAAASVLQSSSLSSSSSQQGLVPNSETTTIINPNNNTTLIRPQQFYLFNSSMISNNNFHPTITLDLITKPPTSSSSSIPKYSPTNLDFSSTTTTFSPLQYSTQDSSSSRYYWNLNNNKNGKQPLIQYHQGNYYPYQQNCMPIIFQQPLHADCYASSALNNNQQGNITFSLLTSQPSKGSYASPPSKKSYQFLEKRK* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g3799 390 Pfam WRKY DNA -binding domain 124 182 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy13g3799 390 MobiDBLite consensus disorder prediction 207 229 - -
Ahy13g3799 390 SUPERFAMILY WRKY DNA-binding domain 116 184 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy13g3799 390 ProSiteProfiles WRKY domain profile. 118 184 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy13g3799 390 SMART WRKY_cls 123 183 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy13g3799 390 MobiDBLite consensus disorder prediction 82 111 - -
Ahy13g3799 390 MobiDBLite consensus disorder prediction 369 390 - -
Ahy13g3799 390 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 67 323 IPR044810 GO:0003700
Ahy13g3799 390 PANTHER WRKY TRANSCRIPTION FACTOR 72B 67 323 - -
Ahy13g3799 390 Gene3D WRKY domain 108 185 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g3799 Ahy-Chr13 137145411 137147627 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g3799 17 260 WRKY Transcription Factor Family AT5G15130 45.802 3.59e-57 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Ahy13g3799 WRKY 1.10E-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g3799 - - adu:107481098 627.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g3799 13 137145411 137147627 Ahy13g3799 13 137145411 137147627 ECH
Ahy13g3799 13 137145411 137147627 Ahy11g1870 11 121819433 121824845 ECH