Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g3777 ATGAAAACGGTTTTATCGATGGTTTATTGCAGTTTATTTGAGTTGAAAGGGAGGCTCCATGATGCCCTCACAATCTATCACCTTGGTATTTCCAGGAATGCAGAGCCAATTGAGTGGTTGAAGAAGGCACAGGCATTATGTCACCAGAGAATATCTGAAATTTGGAAGGCTGCTGAAAGGCAGAGGATTGATTATAAGGGATCCACAGAGTTGGGAAACATTGGCATTAATCCATGGGATTCCTCCATTTTGGAAGACCTGATGAAGAAGATAAATCCTACAATTAAAAAATTTTATGTGCTTTATGCTTGTATAAATGCATTTCAGGGGTATCACTTGAGCACTAAATCTTATACAGGAAAAGTGGCCTTATCTACTTTGAAGAATGCATCAAGGAACAAAGTTATAGAGATAGGCGGGAGGAAGTACCATATCAAAGGTTGCGCTGGACAAGGTGGTTTTGCTCAAGTATACAAGGCCTTTGTCAACAGTGATCCAAATGATGTTGTTGCGCTAAAGATACAAAAGCCAGCTTTCCCTTGGGAATTTTACATGTATCGTCAGCTTGATATGCGGATCACTGGCAGAGAAAGGTCAAGCTATGGTTTGGCTCAGAGAATTCATCTGTATGCAGACTGTAGCATACTCATCTGTGACTATTTAGCTCATGGAACGCTACAGGATGTCATAAACAGATATGCGGTCCAAGGGAAACCCATGGAAGAAGTTTTATGTATTTATTACACGATAGAAATGTTACACATGGTTGAAACTTTGCATGATGTTGGCTTGATTCATGGTGATTTCAAGCCTGATAATCTGCTTATTCGCTATGCTAGGGATGACCTTACTGAAGAAGGGTTCTTGGACCGAAGTGGTCCTTGGTGTGATCAGGGTCTTTGCCTTGTAGACTGGGGAAGAGGGATTGTTCTGGATCTCTTTCCAGATGACATAGTATTTAAGGGTGATTGCGGAACTTCTGGATTTCGCTGCATTGAGATGCAAGAGGATAAGCCATGGAAATTTCAGGTAGACGCATACGGCCTTTGCGTTGTTGTCCATATGATGTTGCATAATTGCTATATGGAGATTGCCAAAGAAGAATCATCTGATGGAGGCTACATGTATCTTCCCAAACAACGCTTTAAACGCTGCAGGAGGCTATATATATATATGTGTATGTATATTTGA 1191 0.4089 MKTVLSMVYCSLFELKGRLHDALTIYHLGISRNAEPIEWLKKAQALCHQRISEIWKAAERQRIDYKGSTELGNIGINPWDSSILEDLMKKINPTIKKFYVLYACINAFQGYHLSTKSYTGKVALSTLKNASRNKVIEIGGRKYHIKGCAGQGGFAQVYKAFVNSDPNDVVALKIQKPAFPWEFYMYRQLDMRITGRERSSYGLAQRIHLYADCSILICDYLAHGTLQDVINRYAVQGKPMEEVLCIYYTIEMLHMVETLHDVGLIHGDFKPDNLLIRYARDDLTEEGFLDRSGPWCDQGLCLVDWGRGIVLDLFPDDIVFKGDCGTSGFRCIEMQEDKPWKFQVDAYGLCVVVHMMLHNCYMEIAKEESSDGGYMYLPKQRFKRCRRLYIYMCMYI* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g3777 396 Gene3D Transferase(Phosphotransferase) domain 1 140 394 - -
Ahy13g3777 396 PANTHER MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1 9 52 IPR015661 GO:0007094
Ahy13g3777 396 SMART serkin_6 143 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g3777 396 SUPERFAMILY Protein kinase-like (PK-like) 140 363 IPR011009 -
Ahy13g3777 396 PANTHER BUB1 KINASE, ISOFORM A-RELATED 9 52 - -
Ahy13g3777 396 ProSiteProfiles Protein kinase domain profile. 143 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g3777 396 PANTHER MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1 61 385 IPR015661 GO:0007094
Ahy13g3777 396 Gene3D - 5 66 - -
Ahy13g3777 396 PANTHER BUB1 KINASE, ISOFORM A-RELATED 61 385 - -
Ahy13g3777 396 Pfam Protein kinase domain 143 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g3777 396 ProSitePatterns Serine/Threonine protein kinases active-site signature. 264 276 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g3777 Ahy-Chr13 136785797 136790483 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g3777 142 357 CBL-interacting serine-threonine protein kinases AT2G26980 26.364 7.12e-08 52.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK BUB Ahy13g3777 Pkinase 9.00E-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g3777 K02178 - gmx:100802272 588.186