Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g3770 ATGGGTGCAGGGGACTACTACAAGGTTCTGAAGGTGAATCGTCACGCCACAGAAGAGGAGCTTAAGAAAGCATACAAGAGGCTTGCAATGAAGTGGCATCCAGATAGGAACCACCATCAAGAAGTGAAGAACAAGGAAGAAGCTGAAGCAAAGTTCAAGCAGATATCTGAGGCCTATGATGTCTTGAGTGACCCCAAAAAGCGCCAGATCTATGATTTCTATGGCCACTACCCTCTCAATTCCATGAAGGTTAACAAAAAGGAACAAGACTATGATGGTAGGAATAATAATGTGAAGGAGGAGAAAGCAGGGGTGGTGGTTGAGACCAAACTTGTGTGCACCCTTGAGGAGCTTTACAAAGGTTGTAGAAAGAAGTTGAAGATCTCAAGAAATGTTGTTGATGAACTCGGCAGCAAGTTGAAGTGTGTGGAAGAAACCTTGAAGATAGACATTAAACCAGGTTGGAAAAAAGGAACAAAGATAACATTCCCTGGAAAAGGAAACCAAGAACAAGGAGGGTCTCAACCTTCTGATCTAGTCTTTGTAGTGGATGAGAAACCACATGCTGTGTTCAAGAGAGATGGAAATGACTTGGTGATCACACAGAAGATCTTGCTTGTGGAGGCACTCTCAGGGAAGACACTCAACTTGACAACCTTGGACGGAAGAGAAATCGCCATTGAAGTGACCGATGTTGTGAAACCGAGGCATGTTATGGTGGTCCCAAATGAAGGGATGCCAATTTCTAAAGAACCAGGGAAGAAAGGATCCTTGAGAATCAAGTTTGATGTTATGTTCCCTTCAAGGCTTTCCACACATCAGAAGCATGAGCTTAAGAAGATTATGAGAAAGGATTATAAACTGTCATCATGA 873 0.4307 MGAGDYYKVLKVNRHATEEELKKAYKRLAMKWHPDRNHHQEVKNKEEAEAKFKQISEAYDVLSDPKKRQIYDFYGHYPLNSMKVNKKEQDYDGRNNNVKEEKAGVVVETKLVCTLEELYKGCRKKLKISRNVVDELGSKLKCVEETLKIDIKPGWKKGTKITFPGKGNQEQGGSQPSDLVFVVDEKPHAVFKRDGNDLVITQKILLVEALSGKTLNLTTLDGREIAIEVTDVVKPRHVMVVPNEGMPISKEPGKKGSLRIKFDVMFPSRLSTHQKHELKKIMRKDYKLSS* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g3770 290 Pfam DnaJ domain 5 72 IPR001623 -
Ahy13g3770 290 PRINTS DnaJ domain signature 25 40 IPR001623 -
Ahy13g3770 290 PRINTS DnaJ domain signature 47 67 IPR001623 -
Ahy13g3770 290 PRINTS DnaJ domain signature 7 25 IPR001623 -
Ahy13g3770 290 PRINTS DnaJ domain signature 67 86 IPR001623 -
Ahy13g3770 290 CDD DnaJ 5 64 IPR001623 -
Ahy13g3770 290 Pfam DnaJ C terminal domain 107 267 IPR002939 -
Ahy13g3770 290 ProSiteProfiles dnaJ domain profile. 5 75 IPR001623 -
Ahy13g3770 290 SMART dnaj_3 4 67 IPR001623 -
Ahy13g3770 290 ProSitePatterns Nt-dnaJ domain signature. 52 71 IPR018253 -
Ahy13g3770 290 PANTHER DNAJ HEAT SHOCK FAMILY PROTEIN 1 284 - -
Ahy13g3770 290 SUPERFAMILY HSP40/DnaJ peptide-binding domain 190 276 IPR008971 GO:0006457|GO:0051082
Ahy13g3770 290 SUPERFAMILY HSP40/DnaJ peptide-binding domain 108 188 IPR008971 GO:0006457|GO:0051082
Ahy13g3770 290 Gene3D - 188 268 - -
Ahy13g3770 290 CDD DnaJ_C 107 270 - -
Ahy13g3770 290 Gene3D DnaJ domain 3 108 IPR036869 -
Ahy13g3770 290 SUPERFAMILY Chaperone J-domain 4 80 IPR036869 -
Ahy13g3770 290 Gene3D - 109 186 - -
Ahy13g3770 290 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g3770 Ahy-Chr13 136703941 136706690 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g3770 6 72 C2H2 Transcription Factor Family AT1G74250 38.806 1.97e-10 59.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g3770 13 136703941 136706690 Ahy13g3770 13 136703941 136706690 ECH