Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g3758 ATGGATCCGGGTGCGATGATGAACGAGGGCTCCTTTGGGAATGGGGGAGGCAATACGGTGCCGTTTAGCTTGGCGGAGATCTGGCCGTTTCCGCAGGCCGTCAACGCTGCTGGAGGCGGCGCCTTGGGGCTCAGGAGGCCGCAGTTTGGCTTGGGACAGTTTGGGGATTTCATTGCCGGTCCCAACCGGGAACCTGGACCGGTTGCTTCAGAACAGAAGGCGGCCAGCGGTGGCGGTGGCGGTGGTAGTAGGAAGAGGCGTGAATCAGAGGAGGAATCCCCTAAGGGTGTTTCCACCAGCAATGTTGCACCTAATGCCGTGAATGATGGGGATGGAAAACGGCTTAAAGGAGGAGGAGGAGCGTCTGGGAGCAGGAATGAAAGCCGTGACGCGAAGGTTGAAGGAGCAGAAGCCAGTTCAGGAAAGCCTGCGGACCAAAATAATCAGACACCACCACCTGACCCTCCTAGGCAAGATTACATCCACGTCCGAGCCAGAAGGGGTCAAGCTACTGATAGCCACAGTCTTGCTGAAAGAGCTAGAAGGGAAAAGATTAGTGAAAGGATGAAAATTCTTCAGGATTTGGTCCCTGGTTGTAATAAGGTTATTGGAAAAGCATTGGTCCTTGATGAGATAATTAATTATATCCAATCCCTTCAGCGTCAAGTTGAGTTTTTGTCAATGAAGCTTGAAGCAGTGAATTCAAGACTGAACACTGGCATTGAAGCTTTTCCTCCTAAAGATTTTGGTCAGCAAACATTTGATCCGGCGAGCTTGCCATTTGGTTCTCAGGCTACTAGAGACTATAGCAGAGGTTCTTCCCCAGAGTGGTTACATATGCAGGTAGGAGGTGCTTTCGAAAGAACAACGTAG 873 0.512 MDPGAMMNEGSFGNGGGNTVPFSLAEIWPFPQAVNAAGGGALGLRRPQFGLGQFGDFIAGPNREPGPVASEQKAASGGGGGGSRKRRESEEESPKGVSTSNVAPNAVNDGDGKRLKGGGGASGSRNESRDAKVEGAEASSGKPADQNNQTPPPDPPRQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRLNTGIEAFPPKDFGQQTFDPASLPFGSQATRDYSRGSSPEWLHMQVGGAFERTT* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g3758 290 Pfam Helix-loop-helix DNA-binding domain 173 220 IPR011598 GO:0046983
Ahy13g3758 290 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 167 236 IPR036638 GO:0046983
Ahy13g3758 290 Coils Coil 216 236 - -
Ahy13g3758 290 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 1 290 IPR024097 GO:0006355
Ahy13g3758 290 SMART finulus 175 225 IPR011598 GO:0046983
Ahy13g3758 290 MobiDBLite consensus disorder prediction 41 159 - -
Ahy13g3758 290 Gene3D - 166 242 IPR036638 GO:0046983
Ahy13g3758 290 PANTHER BNAC05G07950D PROTEIN 1 290 - -
Ahy13g3758 290 CDD bHLH_AtBPE_like 159 244 - -
Ahy13g3758 290 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 169 219 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g3758 Ahy-Chr13 136613513 136616375 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g3758 1 248 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G59640 56.175 1.16e-75 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy13g3758 HLH 2.40E-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g3758 - - gmx:100784478 359.762
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g3758 13 136613513 136616375 Ahy13g3758 13 136613513 136616375 ECH