Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g3723 ATGCCATTTGGTTTGGTCTCGGCCTGGAACAAGCGCCGTCGAAGCAAGTCTCAAGATCATACAGACCCTTGGATTTATAGGCCTGCAGAGTTTTGGCAACTGGAAGATCAAGCGCCACAAGCTCCAAAAAAGAGGCATGGATCGTCTGTTTTCACACTCAAGGAGATGGAAGAGGCAACATGTTCATTCAGTGATGATAATCTTCTTGGAAAAGGTGGATTTGGAAAGGTATACAGAGGAACTCTGCGTTCAGGAGAGGTTGTAGCAATAAAAAAGATGGAGCTGCCAGCTATTAGAGAAGCCGAAGGAGAGCGCGAATTCCGGGTGGAAGTGGACATATTGAGCAGACTAGACCACCCAAATCTTGTTTCCTTGATTGGCTACTGTGCTGATGGAAAGCACAGATTCTTAGTATATGAGTATATGCAAAATGGGAACCTGCAACATCATCTGAATGGAATTGGGGAAAGAAAAATGGATTGGCCTCTAAGGCTGAAAGTGGCATTAGGAGCTGCAAAAGGACTTGCTTATCTGCATTCAAGCTCTTGTGTTGGGATCCCTATTGTTCACAGAGATTTCAAATCCACCAATGTTCTTCTAACCTCCAATTTTGAAGCAAAGATATCTGATTTCGGGCTAGCTAAACTAATGCCAGAAGGACAAGAGACACATGTAACTGCTAGAGTGTTTGGTACTTTTGGCTATTTTGATCCTGAGTATACATCGACCGGAAAACTCACTCTACAAAGTGATGTTTATTCTTTTGGCGTTGTTCTTCTGGAGCTTCTGACTGGACGGAGAGCCGTAGATCTAAACCAAGGTCCAAATGATCAGAACCTTGTGGTCCAGGTGAGACACCTACTAAATGACCGGAAGAAGCTTCGAAAGGTGATAGATGCAGAGATGGCTCGAAACTCTTACACTTTGGAGTCTATATTCATGTTTGCCAATTTAGCATCAAGATGTGTTCGTAGTGACAGTAATGAGAGGCCTTCCATGATAGAGTGTGTTAAAGAACTTCAAATCATCATCTTTACAAATTCAAAAGGCTTGGGAATGGTCATGCATAGCTTGAGAATGATGTAG 1086 0.43 MPFGLVSAWNKRRRSKSQDHTDPWIYRPAEFWQLEDQAPQAPKKRHGSSVFTLKEMEEATCSFSDDNLLGKGGFGKVYRGTLRSGEVVAIKKMELPAIREAEGEREFRVEVDILSRLDHPNLVSLIGYCADGKHRFLVYEYMQNGNLQHHLNGIGERKMDWPLRLKVALGAAKGLAYLHSSSCVGIPIVHRDFKSTNVLLTSNFEAKISDFGLAKLMPEGQETHVTARVFGTFGYFDPEYTSTGKLTLQSDVYSFGVVLLELLTGRRAVDLNQGPNDQNLVVQVRHLLNDRKKLRKVIDAEMARNSYTLESIFMFANLASRCVRSDSNERPSMIECVKELQIIIFTNSKGLGMVMHSLRMM* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g3723 361 PANTHER OS01G0750732 PROTEIN 1 360 - -
Ahy13g3723 361 PIRSF ILK 35 352 - -
Ahy13g3723 361 ProSitePatterns Protein kinases ATP-binding region signature. 69 92 IPR017441 GO:0005524
Ahy13g3723 361 ProSitePatterns Serine/Threonine protein kinases active-site signature. 188 200 IPR008271 GO:0004672|GO:0006468
Ahy13g3723 361 Gene3D Phosphorylase Kinase; domain 1 31 141 - -
Ahy13g3723 361 SUPERFAMILY Protein kinase-like (PK-like) 49 346 IPR011009 -
Ahy13g3723 361 Gene3D Transferase(Phosphotransferase) domain 1 142 350 - -
Ahy13g3723 361 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 1 360 - -
Ahy13g3723 361 Pfam Protein kinase domain 64 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g3723 361 ProSiteProfiles Protein kinase domain profile. 63 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g3723 361 CDD STKc_IRAK 69 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g3723 Ahy-Chr13 136127488 136129696 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g3723 46 344 Receptor kinase-like Gene Family AT3G58690 45.724 6.04e-88 269
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIb Ahy13g3723 Pkinase 1.80E-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g3723 - - gmx:100820613 656.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g3723 13 136127488 136129696 Ahy13g3723 13 136127488 136129696 ECH