Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g3716 ATGGCTGGTGATGAAGTAGGTAGTAGCTCTGAGTGGAGCTTTGAGCAGGATAAAGCATTTGAGAATGCCTTGGGTACTTACCCTGAGGACGATCTGGATCGATGGGAGAAGATTGCTGCCGATGTAACTGGGAAGACTTTGGAAGAGGTTAAACAACACTATGAGCTTCTGGTTGATGATGTCAACTTAATTGAATCTGGGCGTGTGACTCTACCGGCTTATAATTCTACTTCAGAAGGCTCAACAGGCAATGCTAGTGATGAAGGAGCTGGCAAGAAGGGTGGCCAACCTTGGAATTCAAACAGCGAGTCTAATAATGGATCTAAGGCTTCAAGATCAGATCAGGAACGGCGCAAGGGTATTGCTTGGACAGAAGATGAACACAGGTTATTTCTTCTTGGATTGGAGAAGTATGGAAAGGGTGACTGGCGAAGTATATCGAGGAATTTTGTGGTGACAAGAACTCCTACACAAGTAGCAAGCCACGCCCAAAAATATTTCATTCGTTTGAACTCGATGAACAAAGATCGAAGGCGATCAAGCATACACGATATCACCAGTGTGAACAATGGAGACGTGTCGGCACCTCAAGGACCAATCACCGGTCAAACGAATGGTTCAGCTGGAAATTCCACGGGAAAGTCACCAAAACAAGGCCCTCCAACCCCAACCGGTCCTCCAACTGTAGGACTGTTTGGTGCTCCGACCATTGGACAACCGATAGGAGGAGGACCCCTTGTGTCTGCAGTTGGCACGCCAGTGAATGCACACATGGCTTATGGTGTCCGAGCTCCAGTTCCCGGGGCTCCGATGAACATGGGTGCTGTGGCATACCCCATGCCCCCAACATCTCATAGGTGA 861 0.4855 MAGDEVGSSSEWSFEQDKAFENALGTYPEDDLDRWEKIAADVTGKTLEEVKQHYELLVDDVNLIESGRVTLPAYNSTSEGSTGNASDEGAGKKGGQPWNSNSESNNGSKASRSDQERRKGIAWTEDEHRLFLLGLEKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDITSVNNGDVSAPQGPITGQTNGSAGNSTGKSPKQGPPTPTGPPTVGLFGAPTIGQPIGGGPLVSAVGTPVNAHMAYGVRAPVPGAPMNMGAVAYPMPPTSHR* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g3716 286 CDD SANT 11 58 IPR001005 -
Ahy13g3716 286 Gene3D - 10 57 - -
Ahy13g3716 286 Pfam Myb-like DNA-binding domain 122 167 IPR001005 -
Ahy13g3716 286 SUPERFAMILY Homeodomain-like 117 172 IPR009057 -
Ahy13g3716 286 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 114 171 IPR017930 -
Ahy13g3716 286 ProSiteProfiles SANT domain profile. 123 171 IPR017884 -
Ahy13g3716 286 PANTHER TRANSCRIPTION FACTOR KUA1 7 275 - -
Ahy13g3716 286 MobiDBLite consensus disorder prediction 73 120 - -
Ahy13g3716 286 PANTHER HOMEODOMAIN-LIKE TRANSCRIPTIONAL REGULATOR-RELATED 7 275 - -
Ahy13g3716 286 ProSiteProfiles Myb-like domain profile. 115 167 IPR001005 -
Ahy13g3716 286 MobiDBLite consensus disorder prediction 184 218 - -
Ahy13g3716 286 MobiDBLite consensus disorder prediction 95 109 - -
Ahy13g3716 286 CDD SANT 122 167 IPR001005 -
Ahy13g3716 286 MobiDBLite consensus disorder prediction 177 237 - -
Ahy13g3716 286 Gene3D - 121 173 - -
Ahy13g3716 286 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 119 169 IPR006447 GO:0003677
Ahy13g3716 286 SUPERFAMILY Homeodomain-like 10 66 IPR009057 -
Ahy13g3716 286 SMART sant 119 169 IPR001005 -
Ahy13g3716 286 SMART sant 8 60 IPR001005 -
Ahy13g3716 286 ProSiteProfiles Myb-like domain profile. 10 58 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g3716 Ahy-Chr13 136056971 136062240 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Ahy13g3716 Myb_DNA-binding 2.00E-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g3716 - - ccaj:109792793 450.669