Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g3706 ATGGCTTCTTCTTCAACCAGGATCTCCAGGCTTCTCTCTCGCTCCTCCGCCTCTCTCTTTTCGCGAGGTGGGAAGGGTTACCTTGGTACAGGATTCAGCAGATATAGCACTGCCACTGCCCTTGAAGAAGAACCAATTAAACCAGCAGTGCAAGTAGAACACACCCAACTCCTGATTGGTGGGAAATTCGTTGATGCTCTTTCTGGTAAAACTTTTCCAACCTTGGATCCAAGAACAGGGGAAGTGATTGCTCATGTTGCTGAGGGTCACTCTGAAGATGTTGATAGAGCAGTTGCAGCCGCAAGAAAGGCATTTGATCAAGGTCCATGGCCTAAGATGACAGCCTATGAAAGGCAAAGGATATTGTTGCGAGCCGCCGATCTGCTTGAGAAGCACAATGATGAGCTTGCAGCACTTGAGACCTGGGATAATGGGAAGCCATATGAACAATCTGCTCAGATTGAAATCCCAATGCTTGTTCGCCTTTTCCGGTACTATGCCGGTTGGGCAGATAAGATCCATGGTATGACAGTTCCGGCTGATGGGCAATATCATGTGCAAACATTGCACGAACCGATCGGTGTTGCTGGTCAGATCATTCCCTGGAATTTCCCTCTCCTCATGTTTGCTTGGAAGGTTGGACCGGCATTGGCCTGTGGCAATACAATTGTTCTGAAAACCGCTGAGCAGACACCATTGTCTGCTTTGTACGCAGCAAAACTATTTCATGAGGCTGGACTTCCTGAAGGTGTTTTGAATGTGGTATCAGGCTTTGGTCCCACTGCCGGCGCTGCTCTTGCAAGTCACATGGATGTGGATAAGCTTGCCTTTACTGGTTCTACTGATACCGGGAAAGTTGTCCTTGAGCTAGCGGCTAGAAGCAATCTTAAGCCAGTAACTTTGGAGCTTGGTGGAAAATCTCCTTTTATTGTATGTGAGGATGCCGATGTAGATCAGGCGGTTGAGCTAGCACACTTTGCCTTATTCTTTAATCAGGGACAATGTTGCTGTGCTGGGTCTAGGACATATGTACATGAGCATGTATATGACGAGTTTGTAGAGAAAGCAAAGGCTCGTGCTTTGAAACGTATTGTTGGTGATCCATTCAAGAGTGGAATAGAGCAAGGTCCGCAGATTGATTCTGAACAATTTGAGAAGATACTGAAGTATATCAGATCCGGCGTTCAAAGTGGAGCTACACTAGAAACCGGAGGAGATAGACTTGGCAGCAAGGGCTTCTATGTTCAGCCTACCGTCTTCTCAAATGTTGAGGATGGCATGCTGATTGCAAAGGAAGAAATATTTGGCCCGGTGCAATCCATACTAAAATTCAAGGACCTCGATGAGGTTATTGAAAGAGCGAACAACACGCGGTATGGACTGGCGGCAGGGGTGTTCACGAAGAACATAGACACGGCAAACACGCTGACGAGAGCGTTGAGAGTTGGAACAGTTTGGGTGAACTGCTTTGACACATTTGATGCAGCAATTCCATTTGGTGGTTACAAGATGAGTGGGCAGGGAAGGGAAAAGGGAGAGTACAGCCTCAAGAATTACTTGCAAGTCAAGGCAGTTGTTACCCCTTTGAAGAACCCTGCATGGCTTTAG 1608 0.4714 MASSSTRISRLLSRSSASLFSRGGKGYLGTGFSRYSTATALEEEPIKPAVQVEHTQLLIGGKFVDALSGKTFPTLDPRTGEVIAHVAEGHSEDVDRAVAAARKAFDQGPWPKMTAYERQRILLRAADLLEKHNDELAALETWDNGKPYEQSAQIEIPMLVRLFRYYAGWADKIHGMTVPADGQYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYAAKLFHEAGLPEGVLNVVSGFGPTAGAALASHMDVDKLAFTGSTDTGKVVLELAARSNLKPVTLELGGKSPFIVCEDADVDQAVELAHFALFFNQGQCCCAGSRTYVHEHVYDEFVEKAKARALKRIVGDPFKSGIEQGPQIDSEQFEKILKYIRSGVQSGATLETGGDRLGSKGFYVQPTVFSNVEDGMLIAKEEIFGPVQSILKFKDLDEVIERANNTRYGLAAGVFTKNIDTANTLTRALRVGTVWVNCFDTFDAAIPFGGYKMSGQGREKGEYSLKNYLQVKAVVTPLKNPAWL* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g3706 535 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 301 308 IPR029510 GO:0016491
Ahy13g3706 535 SUPERFAMILY ALDH-like 50 529 IPR016161 GO:0016491
Ahy13g3706 535 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 307 496 IPR016163 GO:0016620
Ahy13g3706 535 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 2 MEMBER B4, MITOCHONDRIAL-LIKE 22 535 - -
Ahy13g3706 535 Pfam Aldehyde dehydrogenase family 65 525 IPR015590 GO:0016491
Ahy13g3706 535 CDD ALDH_F2BC 52 527 - -
Ahy13g3706 535 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 329 340 IPR016160 GO:0016491
Ahy13g3706 535 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 22 535 - -
Ahy13g3706 535 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 69 525 IPR016162 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g3706 Ahy-Chr13 135828679 135832617 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g3706 4 535 Aldehyde Dehydrogenase Gene Family AT3G48000 78.212 0.0 885
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g3706 K00128 - gmx:100777399 969.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g3706 13 135828679 135832617 Ahy13g3706 13 135828679 135832617 ECH
Ahy13g3706 13 135828679 135832617 Ahy11g1745 11 111918811 111923767 ECH