Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g3686 ATGGCTCAGAAAAAGAAGAGAGACACCGATTCTTCTTCTTCTGATTCTGATTCTTCTGATTCTTCTTCTCCGTCTTCTACTCGTCGTCAAGACAATGATGATAATAAGGACACTTCCTCTTCTTCTTCTTCATCTTCATCCGATTCTAACGGCAGCAACCGCCAAAACAAGAATCAGCGTAAAGTTAAACCGCCGCCGCCACCAATTTCTGATGCTTCCGATTCCTCACCGACTTCTCCGGCGAAGGAGGGTACTCGCTCGTCGCCATCGTCCCGGAATCCTCCACCGCCGTATGAAGATTTGACTCCACCGGAGCGCTCACCACCACCGCCAGAGGCATTGCCGCCGCCGTCACCGCCACCACCAGAAGTGTCGCCTCCACCACCACCACCACCAGAAGTGTCGCCTCCACCGCCGTCGTTTCCACCACCACTGGCACAGATACAAAGCGAAGTGGCTTCTACTCCTCCTCCTCCTCCTCCACCATATACAGCACCACCTTCTCCTCCTCCTCCTTATTCTCCTTCTCCACCTCCTCCTCCGTCTACTCCCAATGAGTCATCGCCAAGCCCCGTCCGACCCGCCTCCGCTAACTCGCAACCGAAGGCAGACCTTGCCACGGATTCACCACGGAGCTTTGGTAAAGCCACAGGCAATACTGATATGGGAAAATTTGCCGGCTATACCCTTGCTGCGGTTTTCTTCTTGGCCTTGGTGGCTGTAACTTTCTTCATGTTCAGGAAGAAGAAATCAAGAGGAGATGTCTATGGTATACCTCGCCATAATCTTCACTTTCACGTTAGACCAGGTGTTGATAGAATTTACTATGGACAGAAGGCTGGCGTTGGAAATGGACCAATATTGTCTCCCAATAGAAGCAACCATGGAAGTGCAAGAAATCCTGGAAGCAGACTTTTAGCACCTTCAGACATAGGGCAACAGGTGAATGCTCCAGTAGCCTTTAGCTATGAAGACATCTTGCAGGTAACCAATTCGTTCTCTGATGAAAACGTCATAGGTGAAGGAGGGTTTGGGCATGTTTACAAAGGGACACTGCCGGACGGAAAGGTGGTTGCGGTTAAGAAGCTAAAGGTTGGCAGCGGCCAGGGGGAAAGGGAATTCAGGGCAGAAGTGGAGATCATCAGCCGTGTCCATCACAGGCATTTGGTATCTTTAGTTGGTTATTGCATATGTGAGGATCAAAGATTGCTCGTCTATGAGTATGTTCCTAATGGGACACTCCATCATCACTTGCATGGAAGTGGAATGCCAGTGTTGACATGGGACAAGAGGTGCAAGATCGCTATTGGTGCTGCAAAGGGTTTGGCATATCTGCATGAGGAATGCAGCCAAAAGATTATTCACAGAGATATTAAATCAGCAAACATACTTTTGGATGATACTTTCGAGGCTCAGGTTGCAGATTTTGGACTTGCAAGGCTAACTGACACTACCAAAAGTCATGTATCAACTAGGGTTATGGGAACCTTTGGGTACATGGCTCCAGAGTATGCAACAAGTGGGAAATTAACTGATAGATCAGATGTTTTCTCATTTGGGGTTGTCCTCCTTGAGCTTCTAACAGGAAGGAAACCAGTTGATGACTCTCAGCCTTTAGGAGATGAGAGTTTGGTTGAATGGGCTCGTCCGCATCTCCTCCATGCAATGGAGACACATGACTATAGTGTGCTAGTAGATCCAAGACTTCAAAATCAATTTGCGGAGGCTGAAATGCTCAGGATGATTGAGGCGGCTGCGGCTTGTGTTCGCCACTCTGCTCCTAAACGGCCTCGAATGGTTCAGGTTGTAAGAGCCTTAGATAGTGGAGCTGAAATATCTGATCTATCTAATGGGGTGAAATATGGTCACAGTACCAACTATGATTCTAACCAGTATGATAAAGACATTAGGATGTTCAGGAGAATGGCCAACGGCAGCTATGGTGGTGACTCTGATTCCGATAAGTACAGTAAAGAAAGCAGTCTCTCAAGAGAAATGTCAACTTGTGGATCCCAAAATGGATCCGGGACAAGTAGTTCTAGCAGCGACTTAGAATCCATAGCACTCACCAAGCATAGTAGAAGTTCTTCGTAG 2094 0.4795 MAQKKKRDTDSSSSDSDSSDSSSPSSTRRQDNDDNKDTSSSSSSSSSDSNGSNRQNKNQRKVKPPPPPISDASDSSPTSPAKEGTRSSPSSRNPPPPYEDLTPPERSPPPPEALPPPSPPPPEVSPPPPPPPEVSPPPPSFPPPLAQIQSEVASTPPPPPPPYTAPPSPPPPYSPSPPPPPSTPNESSPSPVRPASANSQPKADLATDSPRSFGKATGNTDMGKFAGYTLAAVFFLALVAVTFFMFRKKKSRGDVYGIPRHNLHFHVRPGVDRIYYGQKAGVGNGPILSPNRSNHGSARNPGSRLLAPSDIGQQVNAPVAFSYEDILQVTNSFSDENVIGEGGFGHVYKGTLPDGKVVAVKKLKVGSGQGEREFRAEVEIISRVHHRHLVSLVGYCICEDQRLLVYEYVPNGTLHHHLHGSGMPVLTWDKRCKIAIGAAKGLAYLHEECSQKIIHRDIKSANILLDDTFEAQVADFGLARLTDTTKSHVSTRVMGTFGYMAPEYATSGKLTDRSDVFSFGVVLLELLTGRKPVDDSQPLGDESLVEWARPHLLHAMETHDYSVLVDPRLQNQFAEAEMLRMIEAAAACVRHSAPKRPRMVQVVRALDSGAEISDLSNGVKYGHSTNYDSNQYDKDIRMFRRMANGSYGGDSDSDKYSKESSLSREMSTCGSQNGSGTSSSSSDLESIALTKHSRSSS* 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g3686 697 MobiDBLite consensus disorder prediction 662 697 - -
Ahy13g3686 697 MobiDBLite consensus disorder prediction 1 215 - -
Ahy13g3686 697 ProSitePatterns Protein kinases ATP-binding region signature. 339 362 IPR017441 GO:0005524
Ahy13g3686 697 MobiDBLite consensus disorder prediction 37 60 - -
Ahy13g3686 697 MobiDBLite consensus disorder prediction 153 188 - -
Ahy13g3686 697 MobiDBLite consensus disorder prediction 285 305 - -
Ahy13g3686 697 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK13-RELATED 66 671 - -
Ahy13g3686 697 SMART serkin_6 333 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g3686 697 Gene3D Transferase(Phosphotransferase) domain 1 409 624 - -
Ahy13g3686 697 MobiDBLite consensus disorder prediction 74 89 - -
Ahy13g3686 697 MobiDBLite consensus disorder prediction 90 145 - -
Ahy13g3686 697 Pfam Protein tyrosine and serine/threonine kinase 336 606 IPR001245 GO:0004672|GO:0006468
Ahy13g3686 697 MobiDBLite consensus disorder prediction 189 215 - -
Ahy13g3686 697 ProSiteProfiles Protein kinase domain profile. 333 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g3686 697 MobiDBLite consensus disorder prediction 647 697 - -
Ahy13g3686 697 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 66 671 - -
Ahy13g3686 697 Gene3D Phosphorylase Kinase; domain 1 304 408 - -
Ahy13g3686 697 CDD STKc_IRAK 339 607 - -
Ahy13g3686 697 SUPERFAMILY Protein kinase-like (PK-like) 311 606 IPR011009 -
Ahy13g3686 697 ProSitePatterns Serine/Threonine protein kinases active-site signature. 453 465 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g3686 Ahy-Chr13 135538689 135542491 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g3686 179 662 Trihelix Transcription Factor Family AT1G70460 58.635 0.0 545
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Ahy13g3686 PK_Tyr_Ser-Thr 1.80E-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g3686 - - lang:109330554 593.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g3686 13 135538689 135542491 Ahy13g3686 13 135538689 135542491 ECH