Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g3685 ATGAGTGATTCTACAGTTTTAGAGTGGCTTAGGCCCTTTGTTGAGGCCAAAGCTTGGGACTTTGTGGTTGTTTGGAAATATGGGGATGACCCTACTAGCTTCATTGAGTGGCTGGGTTGTTGCTGTAGTGGGAGCTGTGGTGAAAGCATTGAGAATGCAAAGAAGCTCAAAGATGAAGAAATGGATGAAAAACAGAACGACATGGATTCTTCTTCCATTTGCAAGGATGCACATTTTCAGCATCCAATTAGAACCAAGGCTTGTAAGGCTCTTTCTCAGCTTCCTTTTGCAATGTCTCTCTATTCTGGTGTCCATGGAGAGGTTGCAATATCGCAGCAACCAAAATGGCTTACTCATGGAGAGGAAATTGGAACACAAGTTTTGATCCCTGTTGTTGGTGGTCTTGTTGAGCTCTTCACGACAAAGCTTGTTCCAAAAGACAATAACATCTTAGAGTTCATAAGAGCACATTGCTATGTTTCATTGAAGCAAGAAGCTATATGTGCACAGCACCACACCGATGTGAACTTCAGTGAAAATCTGTCATCAGAAGAACAATACACACAGAGCTCGCCACAACTTGCGTCAACTTTAACTGATGGTGTCCATCTTCTTGCAGCAAATTGGTGCAAATCGGATCCTTACATTGAAGAACCTTCCAGTGGATCTAATCCTTCAAGCGAATACACATCATTTGATTCGAAATTTGTCTGCTTGACTCACCATGAATATCTGGGTGAGTCGGTTAAATTATCACCTACCTGCAAAACCGAAAGGCCTAAGTACAATGAAACTTCAGGGAAGCAGCAAGGAACTTTGAGTTCCTATTGTGGCAATGGCAAAAGAAATAAAACAAAATCGGTCAGGGTGCCTCCGAAGGAAGGTTACCATGCTAAAAATCTTGCCACAGAGAGGAGAAGAAGAAACAAGATTAAAAATGGCCTTTTCACTTTAAGGTCTCTAGTCCCAAAGATAACCAAGATGGATAGAGCATCAATTCTAGCAGATGCAATTGACTACATTAAGGAACTGCATGGACAAGTAGAAGATCTAAAAGATGAGGTCAGGAATTTGGAAGTAGAAGACTGTGAGAAGAACACACTGCAATCAATTATGCCAAGTAAAGAACAAGGAGAAAACAGAACTCTCCTTACTGAGCTCAATCAAAGAAGTTCTAATTCCACTAAACAGATAGAGATGAAGATGCAAACAGAAGTGAATCATATAAGCAGGACAGAGTACTTGCTTAAGGTATGCTGGGAGCAGAAGCCAGGTGGGTTTTCAAGGTTGATGGAAGCTATAAATTCATTTGGATTTCAGGTGGAAACTGCCAATATGACCACAATTGACGGAAAGGCTCAGATCATTCTAACAGTTGAGGCAGCCAAGGAGGGAATTCACCCAACTAAGCTGAAGGATTTTTTGACAGAGCAAACAGGTTGA 1443 0.4144 MSDSTVLEWLRPFVEAKAWDFVVVWKYGDDPTSFIEWLGCCCSGSCGESIENAKKLKDEEMDEKQNDMDSSSICKDAHFQHPIRTKACKALSQLPFAMSLYSGVHGEVAISQQPKWLTHGEEIGTQVLIPVVGGLVELFTTKLVPKDNNILEFIRAHCYVSLKQEAICAQHHTDVNFSENLSSEEQYTQSSPQLASTLTDGVHLLAANWCKSDPYIEEPSSGSNPSSEYTSFDSKFVCLTHHEYLGESVKLSPTCKTERPKYNETSGKQQGTLSSYCGNGKRNKTKSVRVPPKEGYHAKNLATERRRRNKIKNGLFTLRSLVPKITKMDRASILADAIDYIKELHGQVEDLKDEVRNLEVEDCEKNTLQSIMPSKEQGENRTLLTELNQRSSNSTKQIEMKMQTEVNHISRTEYLLKVCWEQKPGGFSRLMEAINSFGFQVETANMTTIDGKAQIILTVEAAKEGIHPTKLKDFLTEQTG* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g3685 480 MobiDBLite consensus disorder prediction 257 289 - -
Ahy13g3685 480 MobiDBLite consensus disorder prediction 258 282 - -
Ahy13g3685 480 ProSiteProfiles ACT domain profile. 415 480 IPR002912 -
Ahy13g3685 480 Coils Coil 334 361 - -
Ahy13g3685 480 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 295 344 IPR011598 GO:0046983
Ahy13g3685 480 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 296 361 IPR036638 GO:0046983
Ahy13g3685 480 Pfam Helix-loop-helix DNA-binding domain 302 344 IPR011598 GO:0046983
Ahy13g3685 480 Gene3D - 291 362 IPR036638 GO:0046983
Ahy13g3685 480 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 68 479 - -
Ahy13g3685 480 PANTHER TRANSCRIPTION FACTOR BHLH90 68 479 - -
Ahy13g3685 480 SMART finulus 301 350 IPR011598 GO:0046983
Ahy13g3685 480 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 10 156 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g3685 Ahy-Chr13 135534976 135538634 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g3685 98 475 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G10610 27.907 9.65e-40 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy13g3685 bHLH-MYC_N 1.30E-17 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g3685 - - gmx:100807261 540.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g3685 13 135534976 135538634 Ahy13g3685 13 135534976 135538634 ECH