Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g3650 ATGTCTTCTTCTCTCAATAATCTTCTTTGTCTTCTCTTCTCTCTTTTGGCAACTTCATCTTCTATCAGAGTCTCTGCATTTCGTGTTTCAATGAAAACAACATACATGGACCCGCTAAGTTGCTCTGTAGAGGCTGCCAATACATGCACTGCCTCACTCTACCACATAACTCATGATGATTACAGCCTTGAAGAAATTGCATTTTATTACTCTGTTAACTCTTCACAAATCAAGCCTATTAAGTATGGAACAAGGCAAGATTACCTCATAACAGTTCCTTGTTCTTGCAAGAACACACAAAACCTCAGCGGGTATTTCTATCATACAACCTACAAAAATGTGAAGCATGGGGACATCTTTGTGGACATATCAGCTTCTGTTTACAGTGGACAAGCCATGCTGATCACCCAAAGTTTAATTCCAGGCAAAGATCTAGAAATAGACATTCCATGTGGGTGTTCCGAGGATGAGGGTCAAAGGGTTGTCACATATACAGTGCAGCAGAATGATACACCAGAAACAATTTCCCTTTTGCTTAATGCTACCCTGCCTGCCTTGCTGAGAATGAACAAGATTCTAGCTCAGAAACCTGGTTTCATAGATATTGGTTGGGTGCTCTTTGTTCCTTTGGAATTGAATGGGGTTCATGGGGTTCCTCCACAACCCCCAGAAAAAACGAAACGGAACTGGCCAATGATAGTTGGTATCGTCGTGGGAGTGCTGTTACTTTCAGTTATCATTATCACCATTCTCATAATTCTTTGGAGAAGGAGAGTCCATCAAATCACCAGAAATGATTCCACAGTTGTCTCTAAAAGATCATTTGTCAACAGAAATATTACCTTGCATAACTCCACCCTTTACAAAGAATATATGGGAGATGTAATGCAAATTGAATCAGAGAGGCCAGTGATATATGGTCTTGAGGAGATAGAAGAGGCTACAAATAACTTTGATGAAGCTCGAAAAATCGGAGTTGGCGGGTATGGGAGTGTTTATTTTGGAATCTTAGAGCAGAAGGAGGTTGCTGTGAAAAAGATGAGGTCTAATAAGACTAAGGAATTCTATGCGGAACTCAAGGCCTTGTGTAAGATCCATCATATCAACATTGTGGAGCTATTAGGATATGCCAGAGGAGAAGATCACCTCTATTTGGTGTATGAGTATGTTTCAAATGGATCTCTCAGTGAACATATTCATGATCCATTAGAGCAAGGGCACCAACCTCTTTCTTGGAATGCAAGGGTTCAGATTGCACTCGATGCAGCAAGAGGTATTGAATACATACATGATCATACAAAAGCTCGATATGTGCATCGCGACATAAAGACTAGCAATATTCTCATTGATGAGAAGCTCAGAGCTAAGGTAGCAGATTTTGGACTTGCAATGCTGGTGGACAGAAGCAATGATGAAAATTTCATAGCAACAAGGCTTGTTGGAACACCAGGATACCTTCCACCCGAATCTGTGAAGGAGCTTCAGGTGACCCCCAAAACCGATGTGTTTGCATTTGGAGTGGTTCTAGCAGAACTGATAACAGGGAAACGTGCACTGTTTCGGGACAAGAACGAAGAAGGCACCAAAATGAAATCACTTATTTCACTTGTACATCAAATATTCCAAGATGCAGAGCCAGAGAATGGTCTAGAAGATGTGATAGATAAGAACCTTGAAGCAAACTATCCCATTGAATACGTGTTGAAGGTAGCAGAGATAGCAGGTCGGTGCTTGCAAGAAGATCCAGTAGAAAGGCCTGAAATGAGGGACTTGGTTGGAGCACTGTCACAGATAGTGATGAACTCCATAGAATGGGAAGCATCCCTTGGTGGAAACAGCCAAGTCTTCAGTGGTGTCTTTACTGGAAGATGA 1872 0.4156 MSSSLNNLLCLLFSLLATSSSIRVSAFRVSMKTTYMDPLSCSVEAANTCTASLYHITHDDYSLEEIAFYYSVNSSQIKPIKYGTRQDYLITVPCSCKNTQNLSGYFYHTTYKNVKHGDIFVDISASVYSGQAMLITQSLIPGKDLEIDIPCGCSEDEGQRVVTYTVQQNDTPETISLLLNATLPALLRMNKILAQKPGFIDIGWVLFVPLELNGVHGVPPQPPEKTKRNWPMIVGIVVGVLLLSVIIITILIILWRRRVHQITRNDSTVVSKRSFVNRNITLHNSTLYKEYMGDVMQIESERPVIYGLEEIEEATNNFDEARKIGVGGYGSVYFGILEQKEVAVKKMRSNKTKEFYAELKALCKIHHINIVELLGYARGEDHLYLVYEYVSNGSLSEHIHDPLEQGHQPLSWNARVQIALDAARGIEYIHDHTKARYVHRDIKTSNILIDEKLRAKVADFGLAMLVDRSNDENFIATRLVGTPGYLPPESVKELQVTPKTDVFAFGVVLAELITGKRALFRDKNEEGTKMKSLISLVHQIFQDAEPENGLEDVIDKNLEANYPIEYVLKVAEIAGRCLQEDPVERPEMRDLVGALSQIVMNSIEWEASLGGNSQVFSGVFTGR* 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g3650 623 PANTHER LYSM-DOMAIN PROTEIN KINASE FAMILY PROTEIN-RELATED 22 623 - -
Ahy13g3650 623 SMART serkin_6 318 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g3650 623 ProSitePatterns Serine/Threonine protein kinases active-site signature. 437 449 IPR008271 GO:0004672|GO:0006468
Ahy13g3650 623 Gene3D LysM domain 155 214 IPR036779 -
Ahy13g3650 623 Gene3D Transferase(Phosphotransferase) domain 1 390 609 - -
Ahy13g3650 623 Gene3D Phosphorylase Kinase; domain 1 296 389 - -
Ahy13g3650 623 Pfam LysM domain 164 209 IPR018392 -
Ahy13g3650 623 Pfam Protein kinase domain 319 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g3650 623 ProSiteProfiles LysM domain profile. 162 208 IPR018392 -
Ahy13g3650 623 SUPERFAMILY Protein kinase-like (PK-like) 304 599 IPR011009 -
Ahy13g3650 623 SUPERFAMILY LysM domain 162 209 IPR036779 -
Ahy13g3650 623 ProSiteProfiles Protein kinase domain profile. 318 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g3650 623 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 22 623 IPR044812 GO:0019199|GO:0045087
Ahy13g3650 623 SMART LysM_2 163 209 IPR018392 -
Ahy13g3650 623 ProSitePatterns Protein kinases ATP-binding region signature. 324 346 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g3650 Ahy-Chr13 135130691 135133954 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g3650 292 623 Receptor kinase-like Gene Family AT1G51940 51.039 3.11e-115 356
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Ahy13g3650 Pkinase 3.20E-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g3650 - - gmx:100791718 769.229