Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g3633 ATGGAAGAAGCGTTTAGGCGTCTCAACGGCATGCCTCCGATCCAAGAACCCGACCCGATACAAGACTCAACCATCGCCGACCACCAGAAGAAAACCAACAACAAGAGGATGGCCAAGGACGCCGGTGGCGGCGGCGGCGGCTCTGCCGCGGGGCCAATGAGGTACCGCGGCGTCAGGCGGAGGCCGTGGGGGCGTTACGCGGCGGAGATAAGGGACCCGCAGTCGAAGGAGCGGCGGTGGCTGGGGACGTTCGACACGGCGGAGGAAGCTGCCTGCGCCTACGACTGTGCCGCCAGAGCGATGCGAGGCGCGAAGGCAAGGACGAACTTCGTGTACCCTGATTCTCCTCCTCATCCTCATCCACACCATCACCATCACAATTTTCGTCACTCTGAACTGTTCGAAGCGTTCAACTTCCCGAAGCAGCAGTGCCACGTCAGCAAGTTAGTTCAGAGCGGCCGCCATGGCGTAACTGCTCCATTATCGACTCAGCAGCAGCACCGAAACATCGCTAACAATTCTCATCATTCCCTGAACATGCTTTTGTTCCGCGAGTTTCTGAATTCGAATCCGTGTTTGGTTTCTTCTTCTGCTGCTGCTGCTGGTGGTGTTGGTTCTAGTGGTGCTAATAATAGTCCTTATCAGTATTGCATGAAGGAGGGTGGTTCGGCTTGCTGCTTCAATGGTAACTGTTGCGTTGGTGGTTCCAACAACGGCACGACGGATGTTATTGTTGAAGGTGTCGAGGAAGAAGATCAGTCGTTATTGGAGTTGTTCCCTAGAGAGTCTTCAAACTCTGGTCTGTTGGAAGAGATAGTTCAACGCTTCTTGCCGAAATCCAAAACCGTTCCAAACAAGAATTGCGACAGCACTTTGAAGCTGAAACCCGAGGCAGCGGCAGTTTCGTTTCCTCATCATCAACAACAACAACAACAGGGCTATGATGATGACAGCAGGATGATGAGGGGTTTTGATCATCAAAATTTTCCTGTTCAGCAATTTGATTATGGCTTTAACCCTATTCATGAGGCCTCATCGATGACCATGCCTGTGGGGAACGAACAGTTGATGATGAACCCTACTGCTATGCTGGAAGATGCTTTTCAGTATCAACAATTTCTGAATGCCTTTGCGGCCAGAATGCAGAATGCTTAA 1155 0.5186 MEEAFRRLNGMPPIQEPDPIQDSTIADHQKKTNNKRMAKDAGGGGGGSAAGPMRYRGVRRRPWGRYAAEIRDPQSKERRWLGTFDTAEEAACAYDCAARAMRGAKARTNFVYPDSPPHPHPHHHHHNFRHSELFEAFNFPKQQCHVSKLVQSGRHGVTAPLSTQQQHRNIANNSHHSLNMLLFREFLNSNPCLVSSSAAAAGGVGSSGANNSPYQYCMKEGGSACCFNGNCCVGGSNNGTTDVIVEGVEEEDQSLLELFPRESSNSGLLEEIVQRFLPKSKTVPNKNCDSTLKLKPEAAAVSFPHHQQQQQQGYDDDSRMMRGFDHQNFPVQQFDYGFNPIHEASSMTMPVGNEQLMMNPTAMLEDAFQYQQFLNAFAARMQNA* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g3633 384 MobiDBLite consensus disorder prediction 23 37 - -
Ahy13g3633 384 PRINTS Ethylene responsive element binding protein signature 55 66 IPR001471 GO:0003700|GO:0006355
Ahy13g3633 384 PRINTS Ethylene responsive element binding protein signature 77 93 IPR001471 GO:0003700|GO:0006355
Ahy13g3633 384 MobiDBLite consensus disorder prediction 1 54 - -
Ahy13g3633 384 SUPERFAMILY DNA-binding domain 54 111 IPR016177 GO:0003677
Ahy13g3633 384 ProSiteProfiles AP2/ERF domain profile. 54 111 IPR001471 GO:0003700|GO:0006355
Ahy13g3633 384 Pfam AP2 domain 54 103 IPR001471 GO:0003700|GO:0006355
Ahy13g3633 384 Gene3D AP2/ERF domain 53 112 IPR036955 GO:0003700|GO:0006355
Ahy13g3633 384 CDD AP2 54 110 IPR001471 GO:0003700|GO:0006355
Ahy13g3633 384 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 1 384 - -
Ahy13g3633 384 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ESR2-LIKE 1 384 - -
Ahy13g3633 384 SMART rav1_2 54 117 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g3633 Ahy-Chr13 134949195 134950842 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g3633 1 281 AP2-EREBP Transcription Factor Family AT1G12980 37.102 6.80e-42 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Ahy13g3633 AP2 5.40E-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g3633 - - ahf:112736058 713.375