Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g3613 ATGCACTCTCACTCTCTCCTTTCAATGGAAACGCTCACCACCTCCTCCTCCATCTACCATCACTCTCTACCTCCTCCTCCTCCTCCTCCTCATTACTACTTCCTCTACGCCAACGGGACCACTGACCTCAAGCCTGAGGGACTCGACGGTACTTCCCAACTGGATCATAACATCATGCCCCAACAACCTTCTTTCTTCGTCAACCCAAACCTTCAGCCACCACAACCCCTCCTGCCCAAGCTCGAATATTTCTTCCAAACCGACACAAATGATGATGATGATTCCTCTTCCCTCACCCAAGATCTGAAAGCGCTTGCTGCTGACGCTGCCTTCCTAGCTTTCTCCTCTGCCAATTCGGTCTCTCAGGTGCTGGATGCTCACTCATCCCGGAACGATGACTTCGCGTTCTCCGCTAGTGGAGGCGGTAGCTCCTCCAACTCCAAGAAGGTTGTTGGTGATACATTTGGCCAGCGAACTTCAATATACAGAGGTGTTACCAGACACCGATGGACGGGACGATACGAAGCTCACCTGTGGGATAATAGCTGCCGCCGAGAGGGTCAAGCCAGGAAAGGCCGTCAAGTATATTTGGGTGGATATGACAAGGAAGAAAAGGCCGCAAGAGCCTATGACTTGGCAGCTCTAAAGTACTGGGGCCCCACAGCTACCACTAACTTCCCTGTTTCTAATTATATAAAGGAATTGGAAGAGATGAAAGATGTGGGGAAGCTTGAATTTATTGCATCACTACGAAGGAGAAGTAGTGGTTTCTCCAGGGGAGCTTCCATATACAGGGGTGTTACAAGGCATCATCAACAAGGTAGATGGCAAGCGAGAATAGGCCGCGTTGCAGGGAACAAAGATCTATACCTAGGGACATTTGCAAGTGAAGAGGAAGCCGCGGAGGCATACGATATTGCGGCAATAAAGTTCAGAGGGTTAAATGCAGTAACCAATTTTGAGACGAGTAGGTACAATGTGGAAGCCATAATGAATAATTCTCTTCCCGTTGGCGGGGTAGCCAAACGGTTGAGGCTTTCCCTAGAATCAGAGAAGGAAGAAGCTGCTAGTACTCATACTCATCAGCCACCTAAGACTGAGAGTGAGAGTAGCATCATGACATTGTCAACCATTCCGGCTCCTCCTGCACAGTTTGATTCTGTGACACCATATTGCTACCAATTTCATTCCCCCGATGCCGTTAACGATGCTATCATGCCAATGTAA 1227 0.4898 MHSHSLLSMETLTTSSSIYHHSLPPPPPPPHYYFLYANGTTDLKPEGLDGTSQLDHNIMPQQPSFFVNPNLQPPQPLLPKLEYFFQTDTNDDDDSSSLTQDLKALAADAAFLAFSSANSVSQVLDAHSSRNDDFAFSASGGGSSSNSKKVVGDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQARKGRQVYLGGYDKEEKAARAYDLAALKYWGPTATTNFPVSNYIKELEEMKDVGKLEFIASLRRRSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFASEEEAAEAYDIAAIKFRGLNAVTNFETSRYNVEAIMNNSLPVGGVAKRLRLSLESEKEEAASTHTHQPPKTESESSIMTLSTIPAPPAQFDSVTPYCYQFHSPDAVNDAIMPM* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g3613 408 SUPERFAMILY DNA-binding domain 160 229 IPR016177 GO:0003677
Ahy13g3613 408 CDD AP2 160 229 IPR001471 GO:0003700|GO:0006355
Ahy13g3613 408 SMART rav1_2 161 233 IPR001471 GO:0003700|GO:0006355
Ahy13g3613 408 SMART rav1_2 263 327 IPR001471 GO:0003700|GO:0006355
Ahy13g3613 408 ProSiteProfiles AP2/ERF domain profile. 161 227 IPR001471 GO:0003700|GO:0006355
Ahy13g3613 408 SUPERFAMILY DNA-binding domain 262 322 IPR016177 GO:0003677
Ahy13g3613 408 Gene3D AP2/ERF domain 161 229 IPR036955 GO:0003700|GO:0006355
Ahy13g3613 408 Gene3D AP2/ERF domain 263 323 IPR036955 GO:0003700|GO:0006355
Ahy13g3613 408 CDD AP2 262 323 IPR001471 GO:0003700|GO:0006355
Ahy13g3613 408 MobiDBLite consensus disorder prediction 350 372 - -
Ahy13g3613 408 Pfam AP2 domain 263 313 IPR001471 GO:0003700|GO:0006355
Ahy13g3613 408 Pfam AP2 domain 161 219 IPR001471 GO:0003700|GO:0006355
Ahy13g3613 408 PRINTS Ethylene responsive element binding protein signature 303 323 IPR001471 GO:0003700|GO:0006355
Ahy13g3613 408 PRINTS Ethylene responsive element binding protein signature 162 173 IPR001471 GO:0003700|GO:0006355
Ahy13g3613 408 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 119 367 - -
Ahy13g3613 408 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR BBM 119 367 - -
Ahy13g3613 408 ProSiteProfiles AP2/ERF domain profile. 263 321 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g3613 Ahy-Chr13 134625517 134628984 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g3613 97 353 AP2-EREBP Transcription Factor Family AT1G51190 68.966 2.32e-121 362
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Ahy13g3613 AP2 7.00E-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g3613 K09285 - psom:113357587 375.555