LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy13g3598	ATGTTTATGATCTTCACTTGGTTGATTTTTCTCTATAACACCAAAACTGTAGAGTCTGTTTCATTCAACTTGGATAATTTCATGCCAAATCTATACCTAATTAAATTCGAGGGCGATGCATTTGTGTCGGAAAAAGTTTTACAGCTGACAAAGAACAGAATCGACGGCCCTATTACAAAAAGCGTGGGCCGCGCCTCGTTTGATCAACCGGTGAAGCTTTGGGATAAAGGAACAAGACAGCTCACTGATTTCACCACACATTTCTCTTTTATTATGAAAGCTATCAATCCCAACATGTTCGGTGATGGATTATCATTCTACATTGCACCTTTTGAATCAACCATCCCAAACAATTCAGTTGGAGGGTTCCTTGGGCTCTTCAGCGGGGAATCTGCATTCAACACCACTGCCAATCAAATAGTCGCTGTCGAGTTTGACAGCTTTGAGAATCCATGGGATCCAAACCCTAATCATGTTGGGATCAATGTTAATTCTATAATATCTGTTGCAAACGTGAGTTGGAATAGGAACATGAAGAATGGATCCGTTGCTAATGCTTGGGTTTCATACAACTCCACCACCAAGAATCTCTCCGTGTTCCTTACTTATGCAGATAATCCAACATTCAACGGCAGTTTTAGTCTCTCACATGTCATTGATCTCAGGGAATTCTTGCCGGAATTTGTTAGGATTGGATTCTCCGCCGCCACCGGTGATTGGATCGAAATACACAACGTTCTGTCTTGGTCATTCAATTCAACCTTGGACTCGAGCACGGGGAAAAGCAAGGTTGGTTTGGCCAGTGGTTTGAGTGTTGGATTCGGTACTCTAGCATGTTTAATAGGTGTTATTTGTTTTGTATTTTGGAGGAAGAAAAGAAACCGAGCCAAGAAAGACGACGACGATACGGGGTTCGATGCTTCTATAGAAGATGAATTCGAAAGAGGAACGGGTCCGAAGCGGTTCACTCAGAAGGAGCTAAGCCAAGCGACGAACGGGTTCGCGGAAGAAGGAAAGCTGGGAGAAGGAGGATTTGGAGGTGTGTACAAAGGAGCAGTAGGGAATCCAAGAATGGAAGTTGCGGTGAAGAGAGTATCGAAAGGATCAAAACAGGGGAAAAAGGAGTACATATCAGAAGTAAGAGTAATAAGCAGGCTGAGGCACAGGAATTTGGTTCAACTCATAGGCTGGTGCCATGAGAAAGGTGAGTTTCTTCTTGTTTATGAGTACATGCCTAATGGTAGCCTTGACTCTCATTTGTTTGGAAAAGGAGTCATGCTTTCTTGGGCTGTAAGGTACAAGATTGCATTGGGTTTGGCATCTGCACTTGTTTATCTTCATGAAGAATGGGAACAATGTGTGGTGCATAGGGATATTAAGTCAAGTAATGTCATGTTAGATGCCAATTTCAATGCCAAACTCGGCGATTTCGGTCTAGCAAGGTTGGTGGACCATGAACTGGGGACTCAAACCACGGTTTTGGCCGGCACCATGGGATACCTAGCCCCGGAGTGTGTCACCACTGGGAAATCAAGTAAGGAATCTGATGTGTATAGCTTTGGCGCCGTGGCGCTCGAGATAGCGTGCGGGCGAAGGCCGGTTCAAGTTAAAGAAGAGCCCGGCAAAGTGAGGCTGATAGAATGGGTGTGGAACTTGTATGGACAGGGGAAGCTTCTAGAAGCCGCTGATTGGAGGTTAGATTTGGAATTTGATGTGAAGCAAATGGAGTGCTTGATGACCGTTGGATTGTGGTGTTGTCACCCTGATTATACTATGAGGCCTTCTATAAAGCAAGTCATAAATGTGCTTAATTTTGAAGCTCCTTTGCCAACACTTCCATCACAGTTACCTGTGCCTATGTACTTCGCACCTCCCATGGACATGTGCAAATTCACCTACACTTCTTCTGGAACCACAGCCACATCTAAAGACTCCTCAAACTACTCATCCATGTCAGCAGGGTCCAGAAAATCTCTATTATAG	1983	0.4433	MFMIFTWLIFLYNTKTVESVSFNLDNFMPNLYLIKFEGDAFVSEKVLQLTKNRIDGPITKSVGRASFDQPVKLWDKGTRQLTDFTTHFSFIMKAINPNMFGDGLSFYIAPFESTIPNNSVGGFLGLFSGESAFNTTANQIVAVEFDSFENPWDPNPNHVGINVNSIISVANVSWNRNMKNGSVANAWVSYNSTTKNLSVFLTYADNPTFNGSFSLSHVIDLREFLPEFVRIGFSAATGDWIEIHNVLSWSFNSTLDSSTGKSKVGLASGLSVGFGTLACLIGVICFVFWRKKRNRAKKDDDDTGFDASIEDEFERGTGPKRFTQKELSQATNGFAEEGKLGEGGFGGVYKGAVGNPRMEVAVKRVSKGSKQGKKEYISEVRVISRLRHRNLVQLIGWCHEKGEFLLVYEYMPNGSLDSHLFGKGVMLSWAVRYKIALGLASALVYLHEEWEQCVVHRDIKSSNVMLDANFNAKLGDFGLARLVDHELGTQTTVLAGTMGYLAPECVTTGKSSKESDVYSFGAVALEIACGRRPVQVKEEPGKVRLIEWVWNLYGQGKLLEAADWRLDLEFDVKQMECLMTVGLWCCHPDYTMRPSIKQVINVLNFEAPLPTLPSQLPVPMYFAPPMDMCKFTYTSSGTTATSKDSSNYSSMSAGSRKSLL*	661

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ahy13g3598	660	Pfam	Protein kinase domain	335	601	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Ahy13g3598	660	ProSitePatterns	Legume lectins alpha-chain signature.	225	234	IPR000985	-
	Ahy13g3598	660	ProSitePatterns	Legume lectins beta-chain signature.	141	147	IPR019825	-
	Ahy13g3598	660	SUPERFAMILY	Protein kinase-like (PK-like)	318	628	IPR011009	-
	Ahy13g3598	660	PANTHER	-	15	636	-	-
	Ahy13g3598	660	SUPERFAMILY	Concanavalin A-like lectins/glucanases	18	256	IPR013320	-
	Ahy13g3598	660	PANTHER	RECEPTOR LECTIN KINASE	15	636	-	-
	Ahy13g3598	660	SMART	serkin_6	334	603	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Ahy13g3598	660	ProSiteProfiles	Protein kinase domain profile.	334	612	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Ahy13g3598	660	Gene3D	Transferase(Phosphotransferase) domain 1	411	624	-	-
	Ahy13g3598	660	Pfam	Legume lectin domain	20	258	IPR001220	GO:0030246
	Ahy13g3598	660	CDD	lectin_legume_LecRK_Arcelin_ConA	20	255	IPR001220	GO:0030246
	Ahy13g3598	660	Gene3D	-	17	268	-	-
	Ahy13g3598	660	Gene3D	Phosphorylase Kinase; domain 1	319	410	-	-
	Ahy13g3598	660	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	454	466	IPR008271	GO:0004672\|GO:0006468
	Ahy13g3598	660	MobiDBLite	consensus disorder prediction	639	660	-	-
	Ahy13g3598	660	ProSitePatterns	Protein kinases ATP-binding region signature.	340	363	IPR017441	GO:0005524
	Ahy13g3598	660	CDD	STKc_IRAK	348	604	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy13g3598	Ahy-Chr13	134407182	134409278	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ahy13g3598	3	621	Receptor kinase-like Gene Family	AT5G10530	51.415	0.0	597

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_L-LEC	Ahy13g3598		Pkinase	1.50E-49	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy13g3598	-		-	gmx:100791518	997.653