Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ahy13g3558 | ATGAAACTAACTGCAACAACAACAACCATGACAATGGAAGAAGACTCCTTAGCTGCACTTCCATTTGACAGAGCTGTTGAACAGGCAATTGTATCTATAAAGAAAGGTGCATATTTACTAAAGTGTGGTCGCAGAGGAAAACCAAAGCTCTGCCCTTTCAGACTTTCCCCGGATGAGAGGAATTTGATTTGGTACTCAGGGCAGCAGGAAAAGCATTTGCGATTGAGTTCGGTTTCGAAGATTATTCAAGGGCAGGGAAATATAAGGTGCCAAAGGCAAAATGAAGCTGAAAAGGAGTGCCATTCATTTTCGCTAATCTATGCTGACAGTGAACACTCTCTTGATCTGATATGCAAGGACAAAGCACAGGCTACTACTTGGTTTGTTGGATTGAGAGCTGTGATTTCTCGGTGCCAGCATCCTCGACCTTTCAGTAGTTTAAGAAGCTGCAAAGGGGTTCAGAGTTGTGTCAGTAGTCCGGCCGGAATATTACGAAGAAAGAAAAATCTTGGCCTCCTGGATGATACCTCCCAATTTGCTCAGGTACATAGTGTATGCGCAAGTCCCACTTTGTCACTCTCAGAAAGGTGTTTTTCTGATGGCTTATCATATACATCTGATAAGTTTTATCCATCAACACCTTTCCTTTCCAGTGCAAATGACATGATTGATAATTCTGTCCCAAGTTCTCCATATATTGATCCAGATACTCCTATTAAGATCGAAACAACACGTCTCAACAAGGAGCACAAGAATTTGTCCTGCAGGTCTATGTTGAACCCCGCCACACCACTCATAAGAAACAACAATGCATTGAAGGATGTAATGGTTTGGGGTGGAGGGATTGGAGGTCTTGTAGGGATTGTAAATGAAAGGTTTGTGAACCAACATGGAATATATTCTTTAGTTCCAAAGTTGCTAGAATCCACTATGATGTTAGATGTACAAAATATAGCTTTAGGAGGAAAACATGCTGCCTTGGTAACAAAAGAAGGGGAAGTGTTTTGTTGGGGTCAAGGGAAGTGGGGAAGGTTGGGGCAAAAAATTGATATAGACACTAGCTCCCCGAAAATAGTCGATTCTCTTAATGGTGTTCATATAAAACAGGTAACCTGTGGTGAGTATCATACATGTGCTTTGACAGATTCTGGTGAAGTATATGCATGGGGGAATGATGTTTGTTGTTCGGATTTGGTTAATGAAGGCCGGATAAAAAATCAATGGATACCACATAAACTTTCAGGTCCTCTAGATGGTATTAGCATTTCAAGCATTGCTTGTGGAGAATGGCACACTGCCATTGTCTCTAGCTGTGGAAAATTATTTACATATGGAGATGGTACCTTCGGAGTTCTTGGCCATGGCAATCTTCAGAGCTGTTCTCGACCGAAACATGTTGAGTCTCTTAGTGGTCTAAAGGTGAGGTCTGTTGCTTGTGGTTCATGGCATACAGCTGCAATTGTGGAAGTCATGGTTGATCACTTTCGGTATAATACTCCTACGGGCAAGCTGTTTACTTGGGGAGATGCAGATGAAGGGAGGCTTGGTCATGCAGATAATGGAAACAAGCTTGTGCCGACTTGTGTTTCACAACTCGTTGACTATGATTTTGTTCAAGTAAGTTGTGGAAGAATGTTGACTGTAGCACTTACTAATATGGGCAAGGTATTTGCAATGGGAAGCGCGAGATATGGACAGCTCGGAAATCCTCACGCCAGAGATAGAGCAGTAATGGTTGAAGGACAGCTTAAACAAGAGTTTGTTAAAGTGATTTCGGCTGGTTCATATCATGTTGCTGTTTTGACTTCGGCCGGGAGTGTCTATACATGGGGCAAAGGTGAAAATGGTCAACTTGGACTAGGTGATAGCGAAGACAGATACACGCCTTCTTTTGTTGAGGCTCTAAGAGACAGGCAAGTAGAAACAATAACTTGTGGATCAAGTTTCACGGCTGCAATCTGTTTGCACAGACCGATTTCTATCAGTGACCAGTCAGCTTGTAGTGGGTGTAGGCTGCCGTTTGGATTCACAAGGAAGAAGCATAACTGTTATGATTGTGGCCTTCATTTCTGCCGCGCTTGTAGTAGTAAAAAGGTTATAAATGCTTCTCTAGCCCCAAGTAAGAGCAAGGCCTTTCGAGTTTGTGATCAGTGCTATGATAGAAGGCAAGGAAGTACACATTCAGCAGTGGCTTTGAAGTCTAGAAATTGCAACTCCCAGCAGCTGCACAGACTTCCTGATCTGACTGAAGATAGAGGAGAGACAACTATGGCACAGGGTCCTCTCTTGACGCTCGGCCAATCATGTTATAGGAAAAGCATGCCCAGTGGAAGAAAGGACTGGAAAAACCAACAAGAGAGCCAGCAGCATTTAGAAGATAGTTCTTCTTCTATGTTAGGTGGGATGCCCCAATGGGGGCAAGTTCCATGCCCTGCCCAATTTAGAATCAATTGTAAAGAAAATTTGGCTGGGCATGTTTCTTCGTCGAAAAATAAAGTAGCTACTGTTGCCCCACCAAATATAGAATCTCCTGCGGCAGCATTCAACTTCTCTAGTGCAGAGTCAGATACAACAAAGTCTGATAAGATGCTCATTGAAGAAGTTCAGAGGCTGAGAGCTGAGTTAAAGAGACTTGAAGAACAGTGTGAACTCAAAAACCATAAGATACAAGAGTGCCAACAGAAAATTGAGGAGAGTTGGTTTGTAGCAAAGGAGGAAGCTGCTAAGTCCAAAGCAGCAAAAGAGGTCATAAAAGCTTTGGCTGTAAGGCTTCATACAATATCAGGAAAAGAGAATGCTGGACAAGAAGGAAAAGTTGGGATACATGATTGCATGTCTAATTTGGCACCCATACATATAGATATGAATAGTCCTAGGGATGGCAACATGGACAGTCTATCTAATTCCCCTATAGTATTCTCAGACACATTGAAATCAAAACTTGGGAGAAACATGTTACTCAAGAATGATAGAGTGACGGAAAATTCTAGCGTCGCTAAACCACAGTCACAGCAAGACAATACTGACAGCATGAAGGTTGAATGGGTAGAACAGTATGAGCCTGGTGTTTACATCACATTCACAACCTTGCCATGTGGGAAAAAGGGCCTTAAAAGGGTCAGATTCAGCCGGAAACGATTCTCGGAGAAGGAAGCAGAACGGTGGTGGGAAGAGAATCAATGCAGAGTGTACCATAAATATGAGATTGAAGGGTGTATAAACAATAGCCAAAGTCAGGTGAAAGGCTAA | 3249 | 0.4266 | MKLTATTTTMTMEEDSLAALPFDRAVEQAIVSIKKGAYLLKCGRRGKPKLCPFRLSPDERNLIWYSGQQEKHLRLSSVSKIIQGQGNIRCQRQNEAEKECHSFSLIYADSEHSLDLICKDKAQATTWFVGLRAVISRCQHPRPFSSLRSCKGVQSCVSSPAGILRRKKNLGLLDDTSQFAQVHSVCASPTLSLSERCFSDGLSYTSDKFYPSTPFLSSANDMIDNSVPSSPYIDPDTPIKIETTRLNKEHKNLSCRSMLNPATPLIRNNNALKDVMVWGGGIGGLVGIVNERFVNQHGIYSLVPKLLESTMMLDVQNIALGGKHAALVTKEGEVFCWGQGKWGRLGQKIDIDTSSPKIVDSLNGVHIKQVTCGEYHTCALTDSGEVYAWGNDVCCSDLVNEGRIKNQWIPHKLSGPLDGISISSIACGEWHTAIVSSCGKLFTYGDGTFGVLGHGNLQSCSRPKHVESLSGLKVRSVACGSWHTAAIVEVMVDHFRYNTPTGKLFTWGDADEGRLGHADNGNKLVPTCVSQLVDYDFVQVSCGRMLTVALTNMGKVFAMGSARYGQLGNPHARDRAVMVEGQLKQEFVKVISAGSYHVAVLTSAGSVYTWGKGENGQLGLGDSEDRYTPSFVEALRDRQVETITCGSSFTAAICLHRPISISDQSACSGCRLPFGFTRKKHNCYDCGLHFCRACSSKKVINASLAPSKSKAFRVCDQCYDRRQGSTHSAVALKSRNCNSQQLHRLPDLTEDRGETTMAQGPLLTLGQSCYRKSMPSGRKDWKNQQESQQHLEDSSSSMLGGMPQWGQVPCPAQFRINCKENLAGHVSSSKNKVATVAPPNIESPAAAFNFSSAESDTTKSDKMLIEEVQRLRAELKRLEEQCELKNHKIQECQQKIEESWFVAKEEAAKSKAAKEVIKALAVRLHTISGKENAGQEGKVGIHDCMSNLAPIHIDMNSPRDGNMDSLSNSPIVFSDTLKSKLGRNMLLKNDRVTENSSVAKPQSQQDNTDSMKVEWVEQYEPGVYITFTTLPCGKKGLKRVRFSRKRFSEKEAERWWEENQCRVYHKYEIEGCINNSQSQVKG* | 1083 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ahy13g3558 | 1082 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 502 | 550 | IPR000408 | - | |
| Ahy13g3558 | 1082 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 331 | 380 | IPR000408 | - | |
| Ahy13g3558 | 1082 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 439 | 487 | IPR000408 | - | |
| Ahy13g3558 | 1082 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 383 | 434 | IPR000408 | - | |
| Ahy13g3558 | 1082 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 605 | 653 | IPR000408 | - | |
| Ahy13g3558 | 1082 | SUPERFAMILY | RCC1/BLIP-II | 273 | 657 | IPR009091 | - | |
| Ahy13g3558 | 1082 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 554 | 604 | IPR000408 | - | |
| Ahy13g3558 | 1082 | MobiDBLite | consensus disorder prediction | 788 | 802 | - | - | |
| Ahy13g3558 | 1082 | SUPERFAMILY | FYVE/PHD zinc finger | 660 | 731 | IPR011011 | - | |
| Ahy13g3558 | 1082 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 332 | 383 | IPR000408 | - |
Showing 1 to 10 of 41 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ahy13g3558 | - | - | adu:107481014 | 2184.07 |
Showing 1 to 1 of 1 entries
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Ahy13g3558 | 13 | 133823935 | 133830158 | Ahy13g3558 | 13 | 133823935 | 133830158 | ECH |
Showing 1 to 1 of 1 entries