Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g3557 ATGGCACCAGTTTCATTGCCTCCTGGTTTTAGGTTCCACCCTACAGACGAAGAACTGGTTGCTTATTACCTTAAAAGGAAGATTAATGGCCGTAAAATTGATCTGGAGATCATTCCTGAAGTTGATCTATACAAGTGCGAACCGTGGGACTTGCCAGGGAGGTCGTTGTTGCCGGGTAAGGATTTGGAGTGGTACTTCTTTAGCCCTCGGGACAGGAAGTATCCAAATGGGTCAAGAACTAACAGAGCAACGAAATGTGGGTACTGGAAGGCCACTGGAAAGGACAGGAAGGTAAATTCGCAGAGCCGCGCCGTAGGGATGAAGAAAACCCTTGTGTACTACCGAGGCAGGGCGCCTCACGGGTCTCGCACTGGTTGGGTCATGCACGAGTACCGTCTTCATGAGAGGGAATGCGAAACCAATGCTGCTTCTGGCTTGCAGGATGCCTATGCTCTTTGCCGTGTCTTCAAGAAGGCGGCGGTCATTATCCCCAAAGTGGCAGATCACTATGCTGCTGATAATATCATGATGATGACAACTGATTCTCAAGGAACACCCCAAGTCTTTGACACCATGCCTTGGGATCATCATATTGGGCATAATGGTAAATGCCCACACTTATCTCAAGATCCATTCCTCAATAACCTTCCATCTTCGTCATCCTCCTCATTTCCTCATTATGGAGCCCTAACTTACTCTCCATCTAAGGTGGATGTAGCACTAGAGTGTGCAAGGATGCAGCACAGTTTTTCCATGCCTCCATTGGAGGTAGTGGAGGAATTCCCTAATGTGGGAATTTCAGAGCTCAACATCATGACACGTGGCACCACTTCAATGTGTGGAGGAAGCATGAACAATAACAATGAATCGGATATCTTGCAACAGATTCTTTCACTTGCTAATGCTAATGTTTCTTCCCATGAATTCACAAATCATTCAAACCATTCACACACATTATTGGGTGGCAACAATGCAAATTATGCTGCTCCTCATCATCACGAACATGATTTTGCTTTTAATGCTGGCACAAGTTACACTAATCACGCCGTAAATGATATGAACCCCATGAGATATGAAATCCAAGATCAAAACCTAAGAACAATAGAGATTGGAGATCTTGAAAGCGAGTTCAAGAGCTTTATGGAAGAGCAAAAGACGGTTCCGATTGAGGATATATCAAGCTTCCAAACAAACATACAAGAAAATGAGGTTCAAGAATCTGAGCTACACAATAGCAACAAAGAATTCAGTGAAGCTGACATTGACAATTTCTCAATGGGGTTCATCAACGATGGTGACCCAAATGAGAACTTCATCGATGATGATGACAACATTGATTATTCAAATTCCACAAGCTTTGAGGTCCTTGAAGAAACCAAGGTTAGCCATGGAATGTTTGTGGCGACTCGCCGAGTAGCCGACACATTCTTTCATCAGATTGTTCCTTCACAAACCATCAAAGTTCAACTGAATCCAGTAACAATAATGGGCAACAATTCTTCCATGGAGATGCTCAAGAATAATCAAGAGTCTTTGTTCAAGAAGCTGATGATGATGAAGTCACCAAATACATTAGCAAGTGCTATTGTATTTATCTTTGCACTATTGTTGACGCTTTGTGTTAATTTGAAGGGGCAAGTTGAAAATTATTGGGCATCAAGAAGTGATGATGACACAATTAATGTGAAGAAGAAATGTTGTTATGATGCTAATAGCAGCATGAAGAGAATGAAACAAGTAGCTCACAAGATCATATGGAATCAGCAAGAAAAATCTTGGTGTGTTGGAATTAAAAGTGGGAGAGGATTTAGTGTGGTGTTGAAGAAAATTGGTATTTTCCTCTCCATATCTTTGGCTCTTTGTACCATGTGGGTTAACCATGTTACAATTAGTCCTTAA 1899 0.4218 MAPVSLPPGFRFHPTDEELVAYYLKRKINGRKIDLEIIPEVDLYKCEPWDLPGRSLLPGKDLEWYFFSPRDRKYPNGSRTNRATKCGYWKATGKDRKVNSQSRAVGMKKTLVYYRGRAPHGSRTGWVMHEYRLHERECETNAASGLQDAYALCRVFKKAAVIIPKVADHYAADNIMMMTTDSQGTPQVFDTMPWDHHIGHNGKCPHLSQDPFLNNLPSSSSSSFPHYGALTYSPSKVDVALECARMQHSFSMPPLEVVEEFPNVGISELNIMTRGTTSMCGGSMNNNNESDILQQILSLANANVSSHEFTNHSNHSHTLLGGNNANYAAPHHHEHDFAFNAGTSYTNHAVNDMNPMRYEIQDQNLRTIEIGDLESEFKSFMEEQKTVPIEDISSFQTNIQENEVQESELHNSNKEFSEADIDNFSMGFINDGDPNENFIDDDDNIDYSNSTSFEVLEETKVSHGMFVATRRVADTFFHQIVPSQTIKVQLNPVTIMGNNSSMEMLKNNQESLFKKLMMMKSPNTLASAIVFIFALLLTLCVNLKGQVENYWASRSDDDTINVKKKCCYDANSSMKRMKQVAHKIIWNQQEKSWCVGIKSGRGFSVVLKKIGIFLSISLALCTMWVNHVTISP* 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g3557 632 PANTHER NAC DOMAIN-CONTAINING PROTEIN 86-LIKE 1 173 - -
Ahy13g3557 632 PANTHER NAC DOMAIN-CONTAINING PROTEIN 86-LIKE 207 355 - -
Ahy13g3557 632 Pfam No apical meristem (NAM) protein 7 133 IPR003441 GO:0003677|GO:0006355
Ahy13g3557 632 SUPERFAMILY NAC domain 4 158 IPR036093 GO:0003677|GO:0006355
Ahy13g3557 632 Gene3D NAC domain 15 161 IPR036093 GO:0003677|GO:0006355
Ahy13g3557 632 ProSiteProfiles NAC domain profile. 6 158 IPR003441 GO:0003677|GO:0006355
Ahy13g3557 632 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 173 - -
Ahy13g3557 632 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 207 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g3557 Ahy-Chr13 133805872 133810147 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g3557 1 623 NAC Transcription Factor Family AT1G65910 41.405 1.26e-139 419
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Ahy13g3557 NAM 2.80E-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g3557 - - ahf:112791681 1203.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g3557 13 133805872 133810147 Ahy13g3557 13 133805872 133810147 ECH