Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g3535 ATGAGTTCTTCTTCGTCTAACCAAGTGGCCAAGGCTAAGAAAGTGAAGAAAGCTCTTCAGCCGGAGTGGCTTAAGTCTCTTCTGAAAAGGACTTTCTTTGAATCTTCCTGTGCAACTCATCCTGTGCTTAAGAATGAGTTAAACCAATACTGTGTAACCTGTACTGAGCTAATTTGCCAAAATTGTGCATCTGGACCCAAACATGTTCTTCATAAGGTGATCACAATCTACAAGCATAGTTACAAAGCTGTTGTTCGCATTGATGCTATGAGAGAGCATATTGACTGCTCACAAATTCAGCCTTACAAATCCAATAAGCTTTCCGTTATTGCTCTGGAGCCTCTTCCGCACCATGGTTCTGTAAAATGGAGAAGGGCATCATCATGCAAGACCTGTAGGAGAAAGTTGGCCAACCCCAATTTATATCGTTACTGCTCCATATCTTGCAAGGTCCGAGCTGTTTTAAAGAAGTCTGATCATTCAGTTCCTCCCTTCATTTTGCTTAAGGAGGATCAAAAGGAGGAAGCTGGAACCAGCAAGCGGGTAAATAAGAGAAAGGGAACCCCTGCCAGAGCTCCCTTCTTCTAA 588 0.4303 MSSSSSNQVAKAKKVKKALQPEWLKSLLKRTFFESSCATHPVLKNELNQYCVTCTELICQNCASGPKHVLHKVITIYKHSYKAVVRIDAMREHIDCSQIQPYKSNKLSVIALEPLPHHGSVKWRRASSCKTCRRKLANPNLYRYCSISCKVRAVLKKSDHSVPPFILLKEDQKEEAGTSKRVNKRKGTPARAPFF* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g3535 195 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 8 195 - -
Ahy13g3535 195 SUPERFAMILY B-box zinc-binding domain 36 84 - -
Ahy13g3535 195 Gene3D Classic Zinc Finger 10 96 - -
Ahy13g3535 195 CDD Bbox2 37 76 - -
Ahy13g3535 195 Pfam PLATZ transcription factor 78 151 IPR006734 -
Ahy13g3535 195 PANTHER TRANSCRIPTION FACTOR FAMILY PROTEIN, PUTATIVE-RELATED 8 195 - -
Ahy13g3535 195 MobiDBLite consensus disorder prediction 173 195 - -
Ahy13g3535 195 Pfam B-box zinc finger 35 76 IPR000315 GO:0008270
Ahy13g3535 195 ProSiteProfiles Zinc finger B-box type profile. 37 76 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g3535 Ahy-Chr13 133536390 133539259 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Ahy13g3535 PLATZ 5.50E-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g3535 - - aip:107631430 383.645