Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g3505 ATGCCTCCTCCATTTGATATGATTTCTAAAATGCATCCTCCTAAAGAGGCTTGGAGGCTGAAAGTTAGGGTTCTAAGGCTTTGGGTTGTACCCTCTTTTGGTAACCATGAGGTTCCTAACTCAATGGAGATGATTTTCCTTGATGAGCATTGTGAAAAAATTCAAGCTACAGTCAAGAAACCACTCCTTAATAGGTTTAGGGATCATATAGTTGAAGGACAAGTTTATAGAATAGCATATTTTACTGTTGTGTCAAGTCATGGTAGTTATAGAGCAACTTCTCATGAATTCAAATTGGTTTTCCTTCACCGAACCACTGTTGTAACATTTGATGAAGATGTTATCCCTAAGACTTGTTTCAACATGTTTCCTTTTTCTGAGCTGCTGAACATGACCCAAGATTATGATTTTTTAGTTGATGTCATTGGTCTTTTAACTTCAGTCGGAGAAGAGAAAGAATATGCAAAAGAGGGGAAAATTGTGAAAATGATTGCATTGGAATTAACTTCAAAAGATCTTACAGTACGATGTGCATTGTTTGGGGATTATGTTAATCAAGTAAATCATTTTCTTGCCTCTGGCTATGTGGAGCAGCCTGTTGTAGTCATTCAACTTGCAAAAGTCAAGTTCTTTAGGGGTCAAGTAGGTCTTCAAAATGTGATGTATGCCACTCAAATGTTATTTAATCCTGATATTCCTGAAGTTGTTGAATTCAGGCAGATGTTAGCATGCTTTATTTTGTTGATGTTTATTGTATTCTTTATTTACAAGCAATTTGGAGTAACAAGTACAACTATTTGCATTAATTTTTTTTTTAGTATGATTGAGCAAGATGTCAATGGTACCCAGCCACTGTTTATTGCAAATGAGGGTAAAGTTCTCTCCTTGGAAGATGATTTCATGCGTTTAACTAGAAAATGCACTATTGAAGAGCTTCAAGATAACAATCAGGTTGTCTTCTTTTGA 966 0.3551 MPPPFDMISKMHPPKEAWRLKVRVLRLWVVPSFGNHEVPNSMEMIFLDEHCEKIQATVKKPLLNRFRDHIVEGQVYRIAYFTVVSSHGSYRATSHEFKLVFLHRTTVVTFDEDVIPKTCFNMFPFSELLNMTQDYDFLVDVIGLLTSVGEEKEYAKEGKIVKMIALELTSKDLTVRCALFGDYVNQVNHFLASGYVEQPVVVIQLAKVKFFRGQVGLQNVMYATQMLFNPDIPEVVEFRQMLACFILLMFIVFFIYKQFGVTSTTICINFFFSMIEQDVNGTQPLFIANEGKVLSLEDDFMRLTRKCTIEELQDNNQVVFF* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g3505 321 PANTHER REPLICATION FACTOR A 1, RFA1 20 260 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Ahy13g3505 321 Gene3D - 114 244 IPR012340 -
Ahy13g3505 321 SUPERFAMILY Nucleic acid-binding proteins 3 112 IPR012340 -
Ahy13g3505 321 CDD RPA1_DBD_A_like 19 107 - -
Ahy13g3505 321 Pfam Domain of unknown function DUF223 43 134 IPR003871 -
Ahy13g3505 321 CDD RPA1_DBD_B_like 140 242 - -
Ahy13g3505 321 PANTHER ANIMAL RPA1 DOMAIN PROTEIN 20 260 - -
Ahy13g3505 321 Gene3D - 4 112 IPR012340 -
Ahy13g3505 321 SUPERFAMILY Nucleic acid-binding proteins 120 242 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g3505 Ahy-Chr13 133005566 133006920 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g3505 8 239 Core DNA Replication Machinery Family AT2G06510 27.984 2.49e-14 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g3505 - - aip:110269522 498.819