Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g3487 ATGGAGAGTCCTCATTCTCCTTCTTCTTTCCCTTCCTCGCCTTCCTATTCATCCTCCTCAGAGGGCCAGAGGGCCAGAGCGCCGACGGCATCTTCGACGCCGACGAGCCCCGCACGCCCCTCGCAGTCCGCCGAGCCCTCCAGCTCCTCTACTCCGGCGACCCTGAACTCCAGGTCCAGGCAGCCCGCGACATCCGGAGGCTCACCAAGACCTCCCCCCGCTGCCGCCGACAGCTCTCCGAAGCTGTCGGTCCGCTCGTTTCCATGCTCCGAGTCGACTCGCCCGAGTCACGCGAACCCGCTCTCTTCGCCTTGCTCAACCTCGCCGTCAAGGATGAAAAATGTCTTCTTCTTGAAGCAATCTTTTTTCGGGAACAAAATCAATATTGTGGAGGCTGGTGCATTAGAACCCATAATCAGTTTCCTCAAGTCAGAAGATCTAAATCTGCAGGAGTCTGCAACTGCATCTTTGCTCACACTCTCTGCCTCTTCAACAAACAAACCGATCATCAGCGCTAGCGGAGCCATTCCTCTTCTCGTGGACATCCTGAGAGATGGAACCCCACAAGCCAAAGCTGATGCAGTTATGGCTCTCTCTAACTTATCAACGTACCCCAATAACCTCAGCATCATCCTCCAAACAAATCCAATCCCTTTCATAGTCAACATTCTCAAAACCTGCAAGAAATCATCAAAAACAGCTGAAAAATGCTGTTCCTTGATAGAATCCTTGATGGAGTACGACGAGGGAAGAATCGCCCTGACATTGGAAGAAGGCGGCGTGCTGGCAGTTGTGGAGGTTCTTGAGAGCGGGACACTCCAGAGCAGGGAGCACGCCGTTGGAGCGCTATTGACAATGTGCGAAAGCGACAGGTGTAAATACAGGGAACCAATCCTTAGAGAAGGCGTGATCCCGGGACTTCTGGAGCTAACTGTTCAGGGGACACCAAAGTCTCAGCCGAAGGCACGCACCCTTTTGCAGCTGCTAAGAGAGTCTCCTTACCCGAGATCTGAAATTCAGCCAGACACTCTTGAGAACATAGTGTGCAACATCATTTCACAGATTGATGGGGATGATCAATCTGGTAAAGCAAAGAAGATGCTGGCTGAGATGGTGCAAGTTAGCATGGAACAGAGTTTAAGGCATTTACAGCAAAGGGCTCTTGTATGCACACCCACAAGTGATCTTCCTATTGCTTCAGAAGTTCCTTCAAAATCATAG 1221 0.516 MESPHSPSSFPSSPSYSSSSEGQRARAPTASSTPTSPARPSQSAEPSSSSTPATLNSRSRQPATSGGSPRPPPAAADSSPKLSVRSFPCSESTRPSHANPLSSPCSTSPSRMKNVFFLKQSFFGNKINIVEAGALEPIISFLKSEDLNLQESATASLLTLSASSTNKPIISASGAIPLLVDILRDGTPQAKADAVMALSNLSTYPNNLSIILQTNPIPFIVNILKTCKKSSKTAEKCCSLIESLMEYDEGRIALTLEEGGVLAVVEVLESGTLQSREHAVGALLTMCESDRCKYREPILREGVIPGLLELTVQGTPKSQPKARTLLQLLRESPYPRSEIQPDTLENIVCNIISQIDGDDQSGKAKKMLAEMVQVSMEQSLRHLQQRALVCTPTSDLPIASEVPSKS* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g3487 406 Pfam Armadillo/beta-catenin-like repeat 125 160 IPR000225 GO:0005515
Ahy13g3487 406 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 125 390 - -
Ahy13g3487 406 PANTHER U BOX DOMAIN-CONTAINING 125 390 - -
Ahy13g3487 406 MobiDBLite consensus disorder prediction 83 108 - -
Ahy13g3487 406 SUPERFAMILY ARM repeat 124 316 IPR016024 -
Ahy13g3487 406 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 133 175 IPR000225 GO:0005515
Ahy13g3487 406 SMART arm_5 163 203 IPR000225 GO:0005515
Ahy13g3487 406 SMART arm_5 248 288 IPR000225 GO:0005515
Ahy13g3487 406 SMART arm_5 122 162 IPR000225 GO:0005515
Ahy13g3487 406 Gene3D - 120 384 IPR011989 -
Ahy13g3487 406 MobiDBLite consensus disorder prediction 1 65 - -
Ahy13g3487 406 MobiDBLite consensus disorder prediction 1 108 - -
Ahy13g3487 406 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 174 216 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g3487 Ahy-Chr13 132742682 132746462 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g3487 125 334 U-box Gene Family AT2G23140 34.762 5.96e-33 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g3487 - - ahf:112733684 683.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g3487 13 132742682 132746462 Ahy13g3487 13 132742682 132746462 ECH