Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g3478 ATGGGTAACTGTTTTAGTGCCAGGATCAAAGCTGAGAGCCCTCCACGCGATGAGAAGGTTTTGAGTGGTATAAGCAGCAAGGTATCATCTCGTTCCATGCTTATGTCTCCTCTGACAGAGGGCGAGATTCTGCTATCCACCAATTTAAAGAACTTCAGCTTCATTGAACTAAGAACCGCCACAAGGAACTTTCGTCCGGATAGTCTGGTTGGTGAAGGTGGCTTTGGCTCTGTATTTAAGGGGTGGATCGACGAGCACACTCTTGAACCCACAAAACCGGGCACCGGACTCGTCATTGCGGTGAAGAGGCTAAATCAAGAGAGCACACAGGGACATACTGAATGGCTGACAGAAATCAACTACTTGGGTCAGCTGGATCATCCTAATCTTGTGAAACTCATAGGTTACAGCTTAGAAGATGATCACCGGATTTTGGTGTATGAGTTTTTGACTAAAGGCAGTTTAGATAACCATTTGTTTAGGAGAGCTTCTTATGTTCGCCCGCTTTCTTGGAACATACGCATGAATATCGCTCTTGATGCAGCTAAGGGCCTTGCGTTTCTTCACAGCGACCAAGTAGATGTAATATACCGAGACTTGAAGACTTCTAACATCTTGCTTGATTCGAGTTATCATGCAAAACTCTCTGATTTTGGATTGGCAAAGGATGGACCAGTAGGTGACAAGAGCCATGTCTCTACCAGGATAATGGGAACATTTGGCTATGCAGCTCCTGAATACATAGCCACAGGTCATTTAACGAAGAAGAGTGATGTATACAGTTTTGGCGTTGTACTGCTGGAAATCATAGCGGGGAAACGCGCATTAGATAAGAACAGACCAACAGGGGAGCATAATTTGGTTGATTGGGCCAAGCCTTTGCTCGTCAGCAAAAGAAAAATCTCACAAGTCATGGATTCCCGTTTGGACAGTCAATATCCTTTGCGCGAAGCCATGAAAGTTGCAGTTCTTGCAATCAAATGCCTCTCTGCTGAACCCAAATTCAGGCCTACCATGGATGAGGTTGTAAGATCCTTGGAGCAACTCAAGGATTCTGAAGACACAACAACAACAAGTGGAGTGGACAAATCTCCAGATCAAACAGTTAAAACGAATGGTAATACTGCAAGATCTAGTAGAGTTAGTTCAAAACAACATAGAAGAAGTAACAATGAATCTTTAAATGGAGAAGGTAGTTCTAATAATCAGACACCATCAGCTTCTCCTCTTCACACTTAG 1239 0.4374 MGNCFSARIKAESPPRDEKVLSGISSKVSSRSMLMSPLTEGEILLSTNLKNFSFIELRTATRNFRPDSLVGEGGFGSVFKGWIDEHTLEPTKPGTGLVIAVKRLNQESTQGHTEWLTEINYLGQLDHPNLVKLIGYSLEDDHRILVYEFLTKGSLDNHLFRRASYVRPLSWNIRMNIALDAAKGLAFLHSDQVDVIYRDLKTSNILLDSSYHAKLSDFGLAKDGPVGDKSHVSTRIMGTFGYAAPEYIATGHLTKKSDVYSFGVVLLEIIAGKRALDKNRPTGEHNLVDWAKPLLVSKRKISQVMDSRLDSQYPLREAMKVAVLAIKCLSAEPKFRPTMDEVVRSLEQLKDSEDTTTTSGVDKSPDQTVKTNGNTARSSRVSSKQHRRSNNESLNGEGSSNNQTPSASPLHT* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g3478 412 CDD STKc_IRAK 70 349 - -
Ahy13g3478 412 ProSitePatterns Serine/Threonine protein kinases active-site signature. 195 207 IPR008271 GO:0004672|GO:0006468
Ahy13g3478 412 Gene3D Transferase(Phosphotransferase) domain 1 150 374 - -
Ahy13g3478 412 ProSiteProfiles Protein kinase domain profile. 64 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g3478 412 Pfam Protein tyrosine and serine/threonine kinase 69 346 IPR001245 GO:0004672|GO:0006468
Ahy13g3478 412 SMART serkin_6 64 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g3478 412 ProSitePatterns Protein kinases ATP-binding region signature. 70 102 IPR017441 GO:0005524
Ahy13g3478 412 PANTHER OS01G0588500 PROTEIN-RELATED 17 392 - -
Ahy13g3478 412 PANTHER KINASE 1B 17 392 - -
Ahy13g3478 412 MobiDBLite consensus disorder prediction 352 380 - -
Ahy13g3478 412 Gene3D Phosphorylase Kinase; domain 1 40 149 - -
Ahy13g3478 412 MobiDBLite consensus disorder prediction 392 412 - -
Ahy13g3478 412 MobiDBLite consensus disorder prediction 347 412 - -
Ahy13g3478 412 SUPERFAMILY Protein kinase-like (PK-like) 36 346 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g3478 Ahy-Chr13 132611693 132613578 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g3478 42 408 Glycoside Hydrolase AT3G07070 44.205 6.79e-102 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Ahy13g3478 PK_Tyr_Ser-Thr 4.10E-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g3478 - - gmx:100775335 573.163