Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g3462 ATGAAAGGGTTTGGGTCTTCATGTGGAGCATGCAAGTACCTAAGGAGAAGATGCACAAGAGATTGTGTATTTTCTCCTTACTTCTCCTATGATGAGGCATCAACCCATTTTGCGGCAGTTCATAAGGTGTTTGGTGCTAGCAACGTCTCTAGACTGTTGCTACACCTTCCGTTGCACAACAGAAGTGACGCTGCTATCACCATAACTTACCAAGCTCTCGCTCGCATGCACGATCCTATCTATGGTTGTGTTGCTTATATCTATCTATTGCAGCAACAGGTTGCAAGCTTGCAAAGGGAGATAGATGATATACTAGGGAATAATTTCATGATGAAGAATTCCTCGTGTCTTGGTGTTGAGAATTATTGTGGCAATGTTCATCAATCACCGATGATGAACATCAACAACGGGATAGAGTATACTGTGCAAGAAGGAACAAGGAGTCAATGTTATAAAAGTCAACTAGCTAATCAATTTTCTAGCGATGAAGAAATTGACAGAGAGTATGAAAGATTATTATTGATGGACACCGATAATTTATTATATGGTGAGACAGACCCCATCTCCCTGGAGAAGTTTCTGTCTGGAATTGACCAGGATGTGTTCCTTAATCATCCATGGTTCAAGCATAATAATAATAATGCTGACATTATTGGAAACTAG 663 0.4012 MKGFGSSCGACKYLRRRCTRDCVFSPYFSYDEASTHFAAVHKVFGASNVSRLLLHLPLHNRSDAAITITYQALARMHDPIYGCVAYIYLLQQQVASLQREIDDILGNNFMMKNSSCLGVENYCGNVHQSPMMNINNGIEYTVQEGTRSQCYKSQLANQFSSDEEIDREYERLLLMDTDNLLYGETDPISLEKFLSGIDQDVFLNHPWFKHNNNNADIIGN* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g3462 220 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 215 - -
Ahy13g3462 220 ProSiteProfiles LOB domain profile. 6 108 IPR004883 -
Ahy13g3462 220 Pfam Lateral organ boundaries (LOB) domain 7 102 IPR004883 -
Ahy13g3462 220 PANTHER LOB DOMAIN-CONTAINING PROTEIN 33 1 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g3462 Ahy-Chr13 132256373 132257908 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g3462 1 176 AS2 family AT5G06080 51.955 6.94e-55 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Ahy13g3462 LOB 3.20E-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g3462 K13945 - gmx:100787638 229.18