Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ahy13g3433 | ATGAAGATCTTGACTGAGTGTGGATACTCTTTCACGACATCAGCTGAGCACAAAATTGTGAGAGACATGAAGGAAAAGCTAGCTTATATTGCTCTTGATTATGAGCAAGAGCTAGAAACTGCGAAGACTAGCTCAACTGTTGAGAAGAGCTATGAGCTACCAGATGGACAGGTTATCACAATAAGAGCTGAAAGATTCCAATGCCCTGAAGTTCTCTTCCAGCCATCCATGATCGGGATGGAATCTCCTGGAATCCATGAAACCACATATAATTCGATCATGAAGTGTGATGTTGATATTAGGAAGGATCTCTATGGTAACATTGTCTTGAGTGGTTGTTCCACTATGTTTCCAGGCATTGCTGACAGGATGAGCAAGGATATTACAGCATTAGCACCGAGTAGCATGAAAATTAAGGTTGTAGCACCACCAGAGAGGAAGTACATTGTTTGGATTGGGGGCTCCATTTTGGCATCTCTTGGCACATTCTAA | 492 | 0.4228 | MKILTECGYSFTTSAEHKIVRDMKEKLAYIALDYEQELETAKTSSTVEKSYELPDGQVITIRAERFQCPEVLFQPSMIGMESPGIHETTYNSIMKCDVDIRKDLYGNIVLSGCSTMFPGIADRMSKDITALAPSSMKIKVVAPPERKYIVWIGGSILASLGTF* | 164 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ahy13g3433 | 163 | Gene3D | - | 83 | 149 | - | - | |
| Ahy13g3433 | 163 | SUPERFAMILY | Actin-like ATPase domain | 1 | 163 | IPR043129 | - | |
| Ahy13g3433 | 163 | PANTHER | ACTIN | 1 | 163 | IPR004000 | - | |
| Ahy13g3433 | 163 | Gene3D | - | 150 | 163 | - | - | |
| Ahy13g3433 | 163 | PANTHER | ACTIN-7 | 1 | 163 | - | - | |
| Ahy13g3433 | 163 | SMART | actin_3 | 1 | 163 | IPR004000 | - | |
| Ahy13g3433 | 163 | Pfam | Actin | 8 | 163 | IPR004000 | - | |
| Ahy13g3433 | 163 | Gene3D | Actin; Chain A, domain 4 | 1 | 82 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Ahy13g3433 | Ahy-Chr13 | 131771162 | 131771668 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Ahy13g3433 | 1 | 163 | Cytoskeleton Gene Families | AT5G09810 | 88.957 | 5.59e-104 | 301 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ahy13g3433 | K10355 | - | aip:107633709 | 327.02 |