Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g3382 ATGACATGGTGCAATAGATCATCAGTTGTGGAGGGGGGAATCGAAATAATCAACCACCCCAATCTCAATATTATTGCAATCCCTAGAAATAGTAATGACAATAATAATAGTGTTATTAGTGTTAATCACGCAAATACTCCTCCTAAACCAACCGAAATCCGAGCCGTTACTTGCCCCTCTTGTGGTCATCACATTCAAATACAACAAGATCAGGGTGGGGGAATTCAAGACTTGCCAGGATTGCCAGCTGGAGTGAAATTTGATCCGAATGACCAAGAGATACTGGAGCATTTGGATGCAAAAGTGCAGTCTGATGTGAGAAAGCTTCATCCTCTAATTGATGAGTTCATACCAACTCTTGAGGGCGAGAATGGAATTTGCTATACTCACCCAGAGAAGCTTCCAGGAGTAAGCAAAGATGGACAAGTGCGTCACTTCTTTCACAGGCCTTCAAAAGCATACACAACGGGAACAAGGAAGAGAAGAAAGGTTCACACCGACCAAGAAGGAAGCGAGACTAGGTGGCACAAAACTGGCAAAACCAGACCCATCTCTGTGGCTGGTTCCGTTAAGGGTTTCAAGAAGATTCTTGTTCTCTACACCAACTATGGCAGGCAGAAGAAGCCCGAGAAGACCAACTGGGTCATGCATCAGTACCATCTCGGCTCCAACGAAGAAGAGAAAGACGGCGAACTCGTCGTTTCTAAGGTTTTCTATCAAACACAACCTCGACAGTGTGCAAACAAGGATCCTTATGATGAAAGATTATTGATGACTTCACAAATTAACAGTGTCAATGACATTAGCATTCACGCACTACCCAAGAACAACAACAACAACAATGCAGGTTTTGTGGATTATTATAACCCCGGTTTCATGAATATGAATTATGAACAGATGAACGAGACTACCTCACCGCAACTGATTCCGAATATGGTGGTGCAAGGTGACAGCTCTTCTTTCATTCGGTTACCCAGGTTGGACAGAAAGTAG 993 0.435 MTWCNRSSVVEGGIEIINHPNLNIIAIPRNSNDNNNSVISVNHANTPPKPTEIRAVTCPSCGHHIQIQQDQGGGIQDLPGLPAGVKFDPNDQEILEHLDAKVQSDVRKLHPLIDEFIPTLEGENGICYTHPEKLPGVSKDGQVRHFFHRPSKAYTTGTRKRRKVHTDQEGSETRWHKTGKTRPISVAGSVKGFKKILVLYTNYGRQKKPEKTNWVMHQYHLGSNEEEKDGELVVSKVFYQTQPRQCANKDPYDERLLMTSQINSVNDISIHALPKNNNNNNAGFVDYYNPGFMNMNYEQMNETTSPQLIPNMVVQGDSSSFIRLPRLDRK* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g3382 330 MobiDBLite consensus disorder prediction 154 181 - -
Ahy13g3382 330 PANTHER NAC DOMAIN-CONTAINING PROTEIN 10 1 320 - -
Ahy13g3382 330 ProSiteProfiles NAC domain profile. 81 240 IPR003441 GO:0003677|GO:0006355
Ahy13g3382 330 Gene3D NAC domain 90 244 IPR036093 GO:0003677|GO:0006355
Ahy13g3382 330 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 1 320 IPR044799 GO:0003700
Ahy13g3382 330 MobiDBLite consensus disorder prediction 160 179 - -
Ahy13g3382 330 Pfam No apical meristem (NAM) protein 82 221 IPR003441 GO:0003677|GO:0006355
Ahy13g3382 330 SUPERFAMILY NAC domain 76 240 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g3382 Ahy-Chr13 131062332 131066377 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g3382 1 324 NAC Transcription Factor Family AT1G28470 57.704 2.48e-119 345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Ahy13g3382 NAM 5.50E-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g3382 - - adu:107480763 623.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g3382 13 131062332 131066377 Ahy13g3382 13 131062332 131066377 ECH
Ahy20g0408 20 4143240 4146127 Ahy13g3382 13 131062332 131066377 ECH