Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g3381 ATGCTTCATCTGCTTGTGTGCATGCTCTGCATTCTCCTCTCCCCAGTGACCTCCCTCAACCAAGAAGGCCTCTACCTCCAACAATTCAAGCTAACCCTCGACGACCCCGACAATCGCCTCGCCGACTGGAACCCCCGCCATGCCACCCCTTGCAACTGGTTTGGCGTCCTCTGCGACCCCCCTACCAACACCACCGTCACCTCCCTCTCCCTCCCCGACACTAACATCGCCGGTCCATTCTCCGCCCATATCCTCTGCCGCCTCCCCAACCTCTCCTCCATCAACCTCTTCAACAACTCCATCAACGCCACCCTCCCCCTCGACATCTCCCTCTGCTCCAACCTCCAACACCTCGACCTCTCCCAGAACCTTCTCACCGGCACGCTCCCCCACACTCTCCCTCACCTCCCCAACCTCCGCTACCTCGACCTCACCGGCAACAACTTCTCCGGCCCCATTCCGGACTCCTTCGGGACCTTCCAGAAACTCGAGGTCATCTCCCTCGTTTACAACCTTCTAGAAGGCACCATCCCTCCCTCATTGGGGAACCTAACCACCCTCAAAATGCTCAACCTCTCTTACAACCCATTCTACCCGGGTCGGATCCCGGACTCGCTCGGCAACCTCACCAACCTCGAGGTTCTCTGGCTCACACAGTGCAACCTCGTTGGCACCATTCCAGACTCGCTTGGCAACTTGAAGAACCTCAGGGACTTGGACCTTGCGCTCAACGATTTGTACGGTTCCATCCCCACTTCCCTCACTCGTTTGACTCGTTTGACTCAGATTGAGTTGTACAACAACTCGCTCTCCGGGGACCTGCCTCGTGGCTGGAGAAACCTCACCGCCCTACGCCTTCTCGACGCCTCCATGAACCACTTGACGGGGACCATACCGGAGGAGCTCTGCGCGTTGCCCTTGGAGAGTCTCAACCTCTACGAGAACCGCTTTGAGGGCCAGCTGCCGCCGAGCATTGCCAATTCGCCCAACCTCTACGAGCTCAGGATCTTCGGGAACCGTCTCACCGGAAGGTTGCCGGAGAATCTGGGGCGCCATTCTCCTCTCAGGTGGCTCGACGTCTCCAGCAACCAGTTCTTGGGGCCGATTCCGTCCACGCTGTGCGATCACGGGGAACTGGAGGAGCTTCTTGTGATATACAATTTGTTTTCCGGCGAGATTCCGGCGAGTCTGGGAACGTGCCAGAGCCTGACGCGGGTGAGGCTGGGGAACAACCGGTTCTCCGGCGAGGTGCCGGCGGGGATGTGGGGTCTCCCCCACGTGTACCTTCTTGAACTCGCGGAGAATTCGTTCTCCGGCCCCATTGCGAAGACCATTGCCGGTGCCGGGAACCTTTCGCTGCTGTTTCTCTCGAAGAATAAGTTCGAGGGAGTGATCCCCGACGAGGTTGGGTGGTTGGACAATCTCGTGGAATTTTCTGGCAACGATAACATGTTCAGCGGTTCGATCCCAGAGACTGTTGTGAATCTCGGGCAGCTTGGGACCCTTGATCTTCACAACAACAAACTATCCGGGGAGCTTCCAAAAGGGCTTCATTCTTTGAAAAAGCTGAGCGTTTTGAATTTGGCCAACAATGGCATTGGTGGGAAGATTCCAGATGAGATTGGTAGCTTGTCAGTTTTGAATTCTCTTGATCTCTCCAAGAACCAGTTCTCCGGGATGGTCCCTCACGGATTGCAGAATTTGAAGCTGAACATTCTGAATTTGTCTTACAATCGTCTCTCCGGGGAGCTCCCTCCTCTGTTGGCTAAGGACGTGTACGTGGATAGCTTTCTGGGGAACCCCGGTTTGTGTGGGGATTTGAAGGGTCTCTGCAGTGGAAGAGGCCAAGCCAAGAGTTTGGGCTATGTTTGGCTTCTCAGGACTATCTTCATTGTCGCCACTTTGGTGTTCTTTGTGGGCGTGGTGTGGTTCTACCTCAAGTATAAGACTTTCAAGGATGCCAGAAGGTCCATTGATAAATCGAGGTGGACCTTGATGTCGTTTCATAAGCTGGGTTTTGGTGAAGATGAGATCTTGAATTGCCTTGATGAGGATAATGTGATTGGAAGTGGGTCATCCGGGAGAGTCTACAAGGTGGTGCTTAGCAGCGGGGAAGCGGTTGCGGTGAAGAAGATATGGGGAGGGGCAGGGAAGGGTGGAGAGAGTGGAGATGTGGAAAAAGGTGGTGGTGGACGGGTGCAGGACGAAGCTTTTGATGCGGAGGTTGAGACTTTGGGCAAGATCAGGCACAAGAACATTGTTAAGCTGTGGTGTTGCTGCACAACCAGGGATTGCAAGCTACTGGTTTATGAGTACATGCCCAATGGTAGTCTTGGTGATTTGTTGCATAGCAGCAAAGGTGGGTTGTTGGATTGGCCAACCAGGTATAAGATTGCCGTTGACGCTGCTGAAGGCCTCTCTTATCTACATCATGATTGTGTTCCACCAATTGTTCATAGAGATGTGAAATCCAGCAATATCTTGTTGGATGGGGACTATGGTGCCAGGGTGGCGGATTTTGGAGTGGCCAAGGCCGTCGAAACTGGAGGGAAAGGAGGAACCAAATCCATGTCTGTCATAGCTGGGTCTTGTGGGTACATTGCGCCAGAATATGCATACACTCTCAGAGTGAACGAGAAAAGCGACATATACAGTTTTGGTGTTGTGATACTTGAGTTGGTTACCGGGAGGCGTCCGGTGGATCCTGAATTCGGAGAGAAGGACTTGGTGAAGTGGGTGTGCACCACCCTGGATCAGAAAGGGGTGGACCATTTAATTGACTCGAGGCTTGATTCTTGTTTCAAAGACGAAATTTCCAAGGTTTTCAACATTGGCCTCATGTGCACCAGCCCTCTTCCGATCAACCGGCCCTCCATGAGAAGGGTGGTGAAGATGTTGCAAGAGGTGGCAACAGAGAAACAAGTGAAGCCTGCCAAGAAAGATGGCAAGTTAACTCCTTATTACTATGATGATGCCTCGGATCACGGAAGTGTTGCTTGA 3000 0.5343 MLHLLVCMLCILLSPVTSLNQEGLYLQQFKLTLDDPDNRLADWNPRHATPCNWFGVLCDPPTNTTVTSLSLPDTNIAGPFSAHILCRLPNLSSINLFNNSINATLPLDISLCSNLQHLDLSQNLLTGTLPHTLPHLPNLRYLDLTGNNFSGPIPDSFGTFQKLEVISLVYNLLEGTIPPSLGNLTTLKMLNLSYNPFYPGRIPDSLGNLTNLEVLWLTQCNLVGTIPDSLGNLKNLRDLDLALNDLYGSIPTSLTRLTRLTQIELYNNSLSGDLPRGWRNLTALRLLDASMNHLTGTIPEELCALPLESLNLYENRFEGQLPPSIANSPNLYELRIFGNRLTGRLPENLGRHSPLRWLDVSSNQFLGPIPSTLCDHGELEELLVIYNLFSGEIPASLGTCQSLTRVRLGNNRFSGEVPAGMWGLPHVYLLELAENSFSGPIAKTIAGAGNLSLLFLSKNKFEGVIPDEVGWLDNLVEFSGNDNMFSGSIPETVVNLGQLGTLDLHNNKLSGELPKGLHSLKKLSVLNLANNGIGGKIPDEIGSLSVLNSLDLSKNQFSGMVPHGLQNLKLNILNLSYNRLSGELPPLLAKDVYVDSFLGNPGLCGDLKGLCSGRGQAKSLGYVWLLRTIFIVATLVFFVGVVWFYLKYKTFKDARRSIDKSRWTLMSFHKLGFGEDEILNCLDEDNVIGSGSSGRVYKVVLSSGEAVAVKKIWGGAGKGGESGDVEKGGGGRVQDEAFDAEVETLGKIRHKNIVKLWCCCTTRDCKLLVYEYMPNGSLGDLLHSSKGGLLDWPTRYKIAVDAAEGLSYLHHDCVPPIVHRDVKSSNILLDGDYGARVADFGVAKAVETGGKGGTKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRRPVDPEFGEKDLVKWVCTTLDQKGVDHLIDSRLDSCFKDEISKVFNIGLMCTSPLPINRPSMRRVVKMLQEVATEKQVKPAKKDGKLTPYYYDDASDHGSVA* 1000
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g3381 999 ProSitePatterns Protein kinases ATP-binding region signature. 688 711 IPR017441 GO:0005524
Ahy13g3381 999 Gene3D Phosphorylase Kinase; domain 1 667 772 - -
Ahy13g3381 999 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 5 981 - -
Ahy13g3381 999 SUPERFAMILY L domain-like 379 603 - -
Ahy13g3381 999 ProSiteProfiles Protein kinase domain profile. 682 970 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g3381 999 SUPERFAMILY RNI-like 68 415 - -
Ahy13g3381 999 PANTHER LRR RECEPTOR-LIKE KINASE 5 981 - -
Ahy13g3381 999 Gene3D Ribonuclease Inhibitor 176 278 IPR032675 -
Ahy13g3381 999 Pfam Leucine rich repeat N-terminal domain 20 59 IPR013210 -
Ahy13g3381 999 Gene3D Ribonuclease Inhibitor 307 613 IPR032675 -
Ahy13g3381 999 SMART LRR_typ_2 184 209 IPR003591 -
Ahy13g3381 999 SMART LRR_typ_2 520 543 IPR003591 -
Ahy13g3381 999 SMART LRR_typ_2 233 257 IPR003591 -
Ahy13g3381 999 SMART LRR_typ_2 136 159 IPR003591 -
Ahy13g3381 999 SMART LRR_typ_2 281 305 IPR003591 -
Ahy13g3381 999 SMART LRR_typ_2 544 567 IPR003591 -
Ahy13g3381 999 SMART LRR_typ_2 496 519 IPR003591 -
Ahy13g3381 999 SMART LRR_typ_2 88 112 IPR003591 -
Ahy13g3381 999 Gene3D Ribonuclease Inhibitor 19 175 IPR032675 -
Ahy13g3381 999 SUPERFAMILY Protein kinase-like (PK-like) 678 966 IPR011009 -
Ahy13g3381 999 SMART serkin_6 682 988 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g3381 999 Pfam Protein kinase domain 684 909 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g3381 999 Pfam Leucine rich repeat 89 149 IPR001611 GO:0005515
Ahy13g3381 999 Pfam Leucine Rich Repeat 211 233 IPR001611 GO:0005515
Ahy13g3381 999 Gene3D Transferase(Phosphotransferase) domain 1 773 992 - -
Ahy13g3381 999 ProSitePatterns Serine/Threonine protein kinases active-site signature. 817 829 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g3381 Ahy-Chr13 131038393 131042405 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g3381 16 999 Receptor kinase-like Gene Family AT1G28440 69.838 0.0 1389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Ahy13g3381 Pkinase 1.20E-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g3381 - - gmx:100819887 1644.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g3381 13 131038393 131042405 Ahy13g3381 13 131038393 131042405 ECH
Ahy20g0410 20 4156164 4159859 Ahy13g3381 13 131038393 131042405 ECH
Ahy13g3381 13 131038393 131042405 Ahy3g3114 3 128599839 128603970 hybridization