Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g3377 ATGGAGGGGGAGGGTGGTTCAGAGGGAGAGAATAATCAGAGAAGGGGTGGCACAGATGATAATAGCAATGAAAATATCAATGGAAGCAATAGCAAAGTTGCGAATTCCAATGAGGGGCAGAGCAAGCCCAAGCGCCAGATGAAGACACCCTATCAACTCGAAACCCTCGAGAAAGCTTATGCCTTGGAGACGTACCCTTCTGAGGCTATGAGGGCCGAGCTATCGGAGAAATTGGCGTTGTCTGATCGGCAGCTGCAGATGTGGTTCTGCCACCGGAGGCTGAAAGACAAGAAAGACTTGCCAACCAAGAAGCCGCCGAAGAAGGCCGTGGAGAAAGTGCGGGAGCCAGAGCCTGAACCAGTGCCGGATTCCCCAGTGGATGACCACAGATTGGGCCCCGAGCTAGGCAATGAGAATGGATCCGGGTCTGGTTCTGGGTCAAGCCCGTTTACCCGGTCAGAGTCCAGGAGTGTGGCGCCGCGGGGTTATTATGAATCACAGCAGGCTGCGCTCGAGCTCAGAGCAATTTCTTGTGTGGAGGCACAGTTAGGGGGGCCATTGAGGGAAGATGGACCCATTCTAGGAATAGAGTTTGATGCATTGCCACCAGATGCATTTGGGGCGCCCTTAGAACAGCAGAAGCGACCAAGTCATGCCTATGACAGTAAAGTTTATGAAAGACATAATGCTAGACCAAATAAGGCTGGCCCCAGGTCTGATGGTTTTGGACAATATCCCCAACATCATTTACATGATCCGATGGAAGGTCCTGCAAGAAATACCCATTTTGCACATGGAACTGAACAGTTACATAGAAGTCATGCTACCCAAGGTCATTCTTCTCGAGTCCGTATTTTACCTCAACAAGATAAGCAAGGGATTCCTCATCCATCTCCTCCTCAAGATGATGATGTTGCTTCCCAAAAGCAATTGCACACAAATGTAGTGAACACTGGAGTGAACTCTCATTCTACTGATTACCAAATTGTTGGGCCCGAAAATCCCTATAACCCACCAGGTGGACAAGTTTCCCATATCACTACAATGCAGATTGAGAAAAAACGAAAGAGTGATGATGCTAGAAGTGCAAGGGAAGTTGAAGCCCATGAGATGAGGATCAAGAAAGAGCTTGAGAAACAAGATAACCTTAGACGAAAGAATGAAGAGCGAATGAGGAAAGAAATGGAGAGACAAGATCGTGAAAGAAGGAAGGAAGAAGAAAGGTTGATGCGTGAGAGACAGCGAGAAGAGGAAAGATTAAGGCGTGAGCAAAAACGTGAACTCGAACGAAGGGAAAAGTTTTTGCTGAAAGAAAATTTGAAAGCTGAGAAAATGAGGCAAAAGGAAGAGCTTCGCAAAGAGAAAGAAGCAGAGAGACGCAAAGCTGCCTTGGAAAAGGCAACTGCTCGTAGAATAGCTAAGGAATCCATGGAACTAATTGAAGATGAACAACTGGAATTGATGGAGCTTGCTGCTTCAAGCAAGGGATTGTCCTCTATAATTCATCTTGATTTTGATACTCTGCAAAACCTTGAATCATTTAGGGATTCATTGTGTGTTTTCCCACCTAAGAGTGTAAAGCTAAGAAAACCATTTGCGATCCAACCCTGGATTAACTCAGAAGAGAATGTTGGCAACCTTCTCATGGTTTGGAAATTTTTGATTACTTTTGCTGATATTCTTGAGTTGTGGCCTTTTACTCTCGATGAGTTTGTGCAAGCTTTTCATGATTACGATTCAAGACTGTTGGGTGAAATACATGTTGCTCTCCTTAAGGTGATAATAAAAGACATTGCAGATGTTGCAAGGACACCTTCCACTGGATTAGGAATGAGCCAAAATGGTGCAGCTAATTCAGGAGGTGGCCATCCAGAGATTGTGGAAGGGGCATATGCATGGGGCTTTGACATACGTAATTGGCATAAGCACTTAAATCAGTTGACATGGCCAGAAATTTTTCGACAGCTAGCATTAGCAGCAGGTTATGGACCACAGTTGAAGAAAAGAAATATTACATGGTCATATGCAAATGATAAAGATGAGGGCAGGAGTTGTGAAGATATCATTTCTACACTTAGAAATGGTTCAGCAGCTGAACATGCTGTGGCAAAAATGCGGGAGAGAGGTCTACTAGCACCTCGAAAATCAAGGCACCGCTTAACTCCTGGAACAGTAAAGTTTGCTGCATTTCATGTTCTCTCACTTGAAGGTGGTGAAGGATTGACAGTACTAGAACTTGCAGAAAAAATTCAGAAATCTGGCCTTCGGGACCTGACAACTAGCAAGACACCAGAGGCATCGATTTCTGTCGCTTTGACAAGAGATGCTAAGCTTTTTGAGAGAATAGCTCCATCGACATATCGCGTACGTACTGCATTTAGAAAGGATCCGGCGGATGCTGAGTCTATTCTTTCAGAAGCAAGAAAGAAAATTCAGATATTTGAAAATGGGTTTCTAGCTGGTGAAGACGCTGATGAGGTTGAACGAGAAGACGATATTGAAAGAGATGATGTTGAAAGATATGATGATGTAGAAAGAGAAGAAGAGTCAGAAAGTGAAGAAGTTGATGATGATCCTGAAGTTGACGATTTGCTAGGTCCTTCAAGTGCTAACAAAACATCTGAACTGTGTGATGATTTCTCATCTATTGGAAAAGAAAGTTTGGGTCATAAGGTAGAACTTATTCAAGATCAGTTTGAGAAGGATCTTCCGGAGAATGGTACTAAGGATGTGGATGGTTCTAAAGATGCTCATCTTCCAGATGCTATCACTGGACAACCCGTTATTACAAACTTTGAGGAAGATAATATGGAAATTGATGAAAGCAAGACTGGAGAGTCATGGGTTGAAGGGCTTGCAGAAGGAGAATATTCTGATCTCAGTGTAGAGGAACGTTTAAATGCTCTTGTTGTATTGGTTGGTGTGGCAAATGAAGGAAATTCAATCCGCGTTGTTCTCGAGGATCGTTTGGAAGCAGCAAATGCTCTGAAGAAGCAAATGTGGGCAGAAGCTCAGATAGATAAAATTCGACTGAGAGATGATAATGTAAATAAATCAGATTTTCCATCTATCAATGGGAATAAAGTTGAACCACAATACACAAGTCCTGCTGTGGGGGGGAACCAAAGCCCATTGCTTGACATAAACATTGACAATAATAATAATAATGAGGCATCGCCTAGCACTGCAGAAAATAAAAAAGCTGCAGTTGTACAGAACCTTGCCATGGAAAAGCCCTCAATAGGTCAAGATTACTGCATTGGTCCAGATAACCCTCAAACTCAACTATCTGCTCCCTATTCGAAAAGGTCTCGTTCTCAGTTGAAATCATATATTTCTCACATGGCAGAAGAGATGTCCGTATACAGGTCTTTACCCCTTGGTCAAGATCGCAGACATAATCGTTATTGGCAATTCGTTGCATCTGCTTCTTGCAATGATCCTGGCTCTGGCAGGATCTTTGTTGAATATCTTGATGGCAATTGGAGGCTTATTGATTCTGAAGAGGCCTTTGATGCTCTTTTTAATTCACTGGATTTGCGTGGGATCAGGGAATCTCATTTGCGCATAATGTTGCAAAAGATTGGAAGTTCCTTCAAAGAAAATGTTAGGAAGAATGCACAATCTGCCAATATTGGAAGCAGAGATGAAAGTAATATTAAAAATGAAGCTGATGAAGCAGAGTCCAGTCCTGATTGCCATGCATTGTCTGACAGTCCCAGCAGTACACTCTGTGGCTTGAACTCTGATACATCTGAAACTTCTTCATCATTCAAAATTGAGCTTGGGAAAAGTGAGAGTGAGAAGAAAGGTGCCTTGAGAAGGTATCAAGATTTCCAGAAATGGATGTGGAAAGAATGCTATAACTCATCCATATTATCTGCAATGAAATATGGGAAAATGAGATGCAAACCTCAGGTGGACATCTGTGATATCTGCCTCAACCCTTATTTCTTTGAAGACTCCCATTGCAATTGTTGCCATCGTACTTTTCCCTCAAATAACGGATTTAATTTTTCAAAACATATATTTCAATGTGGGGGCAAATTGTCCAAAGATATTTGTATTCTGGATTGTTCTCTTCCCTTGAGGACAAGGTTGCTTAAGGCCCTGCTGGCTTTTATTGAGGCATCTGTTCCCTCCGAAGCGTTTCAATCAACTTGGACAGAAGATACTAGAAGGCATTGGGGTTTGAAGTTAAGCAAATCATCTTCTGTCGAGGAACTTCTTCAGTTATTGACTGTGTTTGAGAGAGCAATAAAGCGAGATTTTTTATCGTCATCCTTCTCAACAACACAAGAATTGTTGGGATCAAGCAGTATGTCAGAGAGTGCTTTTACCGATCCTGAATCTGTTGCTGTACTTCCATGGGTTCCACAGACCACCTCAGCTGTGTCTCTCAGACTCTCTGAGTTTGATGCGTCCATTAGCTATGTTCAGCTTGAAAAATCTGAGCATCGCAGGGAGAAAGAAACTATAGAATACATGAAGCTTCCTTCAAGATCTAATCCTTTCAAATCTAGTAGAGTAGTGGAACCAGCAGACTTGGACCATGATGAATTCATGAAAGTTAGGTCTGCTCCCATGAAAATTGTAAAAAGTGGCAATAAACGTGGGCGGGGGAATAGTGATAAAGGACGGGGTAAAAAGATAGCTAAAAGAATGCATGATTCCAAACAAGATACTGGCCGCCGCATTGTTAAGGTCACAGAGAATCTTAGTCAAAGACTAAAACAGCAGGGGCAAGGAGCACAAGGACAAAGTGGTGGACGTGGTCGCCGAACTGTCAGGAAAAGACGAGTGGAAAAGAGGGCTGTTGAAGATTTGCTGCTGGGCCACAAGGCTGGCACACACAGTTCCAATATTGTTAGAGAACCATTGAGAAACCTGGATGAGGAATGGGATGATGATGAAAAGGCAAGTCCCATGACTTCCATCCACATGGGGGCTGCCGACAATAGTAACAGTGCCGAAGAGGCAGATTCTGATGACAATGCTCAAGTAGCAGAGTCCAACGACAATGCTCAAGCAGCAGATTCGGATGACAATGCTCAAGAAGTGGATTCCGATGACAATCCTCTAGAAGTGGACTCAGATGACAATGCTCAAGCAGTGGACTCAGATGACAATGGCCAAGCAGTGGAATATGATCAAGGAAACTGGGGAATAGGTTTCAATAACACCCCCAACAGGTGGAGTAGGGATGTGGTTGGAATGATTGATGAAGATGTAGAAGCTTCAGACGAGGACAATGACAACAATGTTGGGCTTGAAGAGAACGAAGAGGAAGAATCAGAGGGTGATGATGTTATGAGTGAGGAGGGTTCAGATGGAATTGCAGATAGAGTTTTGAATGATGACTCGGACTCTGATGATTCTGAAGATTCATCTGATTAG 5397 0.4319 MEGEGGSEGENNQRRGGTDDNSNENINGSNSKVANSNEGQSKPKRQMKTPYQLETLEKAYALETYPSEAMRAELSEKLALSDRQLQMWFCHRRLKDKKDLPTKKPPKKAVEKVREPEPEPVPDSPVDDHRLGPELGNENGSGSGSGSSPFTRSESRSVAPRGYYESQQAALELRAISCVEAQLGGPLREDGPILGIEFDALPPDAFGAPLEQQKRPSHAYDSKVYERHNARPNKAGPRSDGFGQYPQHHLHDPMEGPARNTHFAHGTEQLHRSHATQGHSSRVRILPQQDKQGIPHPSPPQDDDVASQKQLHTNVVNTGVNSHSTDYQIVGPENPYNPPGGQVSHITTMQIEKKRKSDDARSAREVEAHEMRIKKELEKQDNLRRKNEERMRKEMERQDRERRKEEERLMRERQREEERLRREQKRELERREKFLLKENLKAEKMRQKEELRKEKEAERRKAALEKATARRIAKESMELIEDEQLELMELAASSKGLSSIIHLDFDTLQNLESFRDSLCVFPPKSVKLRKPFAIQPWINSEENVGNLLMVWKFLITFADILELWPFTLDEFVQAFHDYDSRLLGEIHVALLKVIIKDIADVARTPSTGLGMSQNGAANSGGGHPEIVEGAYAWGFDIRNWHKHLNQLTWPEIFRQLALAAGYGPQLKKRNITWSYANDKDEGRSCEDIISTLRNGSAAEHAVAKMRERGLLAPRKSRHRLTPGTVKFAAFHVLSLEGGEGLTVLELAEKIQKSGLRDLTTSKTPEASISVALTRDAKLFERIAPSTYRVRTAFRKDPADAESILSEARKKIQIFENGFLAGEDADEVEREDDIERDDVERYDDVEREEESESEEVDDDPEVDDLLGPSSANKTSELCDDFSSIGKESLGHKVELIQDQFEKDLPENGTKDVDGSKDAHLPDAITGQPVITNFEEDNMEIDESKTGESWVEGLAEGEYSDLSVEERLNALVVLVGVANEGNSIRVVLEDRLEAANALKKQMWAEAQIDKIRLRDDNVNKSDFPSINGNKVEPQYTSPAVGGNQSPLLDINIDNNNNNEASPSTAENKKAAVVQNLAMEKPSIGQDYCIGPDNPQTQLSAPYSKRSRSQLKSYISHMAEEMSVYRSLPLGQDRRHNRYWQFVASASCNDPGSGRIFVEYLDGNWRLIDSEEAFDALFNSLDLRGIRESHLRIMLQKIGSSFKENVRKNAQSANIGSRDESNIKNEADEAESSPDCHALSDSPSSTLCGLNSDTSETSSSFKIELGKSESEKKGALRRYQDFQKWMWKECYNSSILSAMKYGKMRCKPQVDICDICLNPYFFEDSHCNCCHRTFPSNNGFNFSKHIFQCGGKLSKDICILDCSLPLRTRLLKALLAFIEASVPSEAFQSTWTEDTRRHWGLKLSKSSSVEELLQLLTVFERAIKRDFLSSSFSTTQELLGSSSMSESAFTDPESVAVLPWVPQTTSAVSLRLSEFDASISYVQLEKSEHRREKETIEYMKLPSRSNPFKSSRVVEPADLDHDEFMKVRSAPMKIVKSGNKRGRGNSDKGRGKKIAKRMHDSKQDTGRRIVKVTENLSQRLKQQGQGAQGQSGGRGRRTVRKRRVEKRAVEDLLLGHKAGTHSSNIVREPLRNLDEEWDDDEKASPMTSIHMGAADNSNSAEEADSDDNAQVAESNDNAQAADSDDNAQEVDSDDNPLEVDSDDNAQAVDSDDNGQAVEYDQGNWGIGFNNTPNRWSRDVVGMIDEDVEASDEDNDNNVGLEENEEEESEGDDVMSEEGSDGIADRVLNDDSDSDDSEDSSD* 1799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g3377 1798 MobiDBLite consensus disorder prediction 216 234 - -
Ahy13g3377 1798 MobiDBLite consensus disorder prediction 93 161 - -
Ahy13g3377 1798 CDD homeodomain 44 98 IPR001356 GO:0003677
Ahy13g3377 1798 MobiDBLite consensus disorder prediction 1 52 - -
Ahy13g3377 1798 MobiDBLite consensus disorder prediction 1533 1601 - -
Ahy13g3377 1798 MobiDBLite consensus disorder prediction 822 876 - -
Ahy13g3377 1798 ProSiteProfiles DDT domain profile. 541 600 IPR018501 -
Ahy13g3377 1798 MobiDBLite consensus disorder prediction 1625 1642 - -
Ahy13g3377 1798 MobiDBLite consensus disorder prediction 18 48 - -
Ahy13g3377 1798 MobiDBLite consensus disorder prediction 1208 1254 - -
Ahy13g3377 1798 MobiDBLite consensus disorder prediction 378 423 - -
Ahy13g3377 1798 Pfam HB1, ASXL, restriction endonuclease HTH domain 723 791 IPR007759 GO:0006355
Ahy13g3377 1798 MobiDBLite consensus disorder prediction 1742 1774 - -
Ahy13g3377 1798 MobiDBLite consensus disorder prediction 1620 1798 - -
Ahy13g3377 1798 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 12 840 IPR044977 GO:0006357
Ahy13g3377 1798 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 840 1670 IPR044977 GO:0006357
Ahy13g3377 1798 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 1677 1798 IPR044977 GO:0006357
Ahy13g3377 1798 MobiDBLite consensus disorder prediction 138 155 - -
Ahy13g3377 1798 MobiDBLite consensus disorder prediction 1667 1682 - -
Ahy13g3377 1798 MobiDBLite consensus disorder prediction 1537 1566 - -
Ahy13g3377 1798 ProSiteProfiles 'Homeobox' domain profile. 39 99 IPR001356 GO:0003677
Ahy13g3377 1798 PANTHER HOMEOBOX DOMAIN PROTEIN 12 840 - -
Ahy13g3377 1798 PANTHER HOMEOBOX DOMAIN PROTEIN 840 1670 - -
Ahy13g3377 1798 PANTHER HOMEOBOX DOMAIN PROTEIN 1677 1798 - -
Ahy13g3377 1798 MobiDBLite consensus disorder prediction 93 134 - -
Ahy13g3377 1798 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 944 987 IPR028942 -
Ahy13g3377 1798 SMART HOX_1 41 103 IPR001356 GO:0003677
Ahy13g3377 1798 Gene3D - 26 100 - -
Ahy13g3377 1798 MobiDBLite consensus disorder prediction 1218 1232 - -
Ahy13g3377 1798 MobiDBLite consensus disorder prediction 824 863 - -
Ahy13g3377 1798 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 1123 1195 IPR028941 -
Ahy13g3377 1798 SUPERFAMILY Homeodomain-like 29 98 IPR009057 -
Ahy13g3377 1798 MobiDBLite consensus disorder prediction 1683 1704 - -
Ahy13g3377 1798 MobiDBLite consensus disorder prediction 204 282 - -
Ahy13g3377 1798 Pfam Homeodomain 42 98 IPR001356 GO:0003677
Ahy13g3377 1798 Coils Coil 366 468 - -
Ahy13g3377 1798 MobiDBLite consensus disorder prediction 1567 1589 - -
Ahy13g3377 1798 ProSiteProfiles HARE-type HTH domain profile. 723 792 IPR007759 GO:0006355
Ahy13g3377 1798 MobiDBLite consensus disorder prediction 1234 1254 - -
Ahy13g3377 1798 SMART testlast3 541 600 IPR018501 -
Ahy13g3377 1798 Pfam DDT domain 542 597 IPR018501 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g3377 Ahy-Chr13 130940219 130949634 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g3377 4 1730 Homeobox Transcription Factor Family AT1G28420 47.614 0.0 1343
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Ahy13g3377 WSD 2.20E-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g3377 - - ahf:112733536 3100.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g3377 13 130940219 130949634 Ahy13g3377 13 130940219 130949634 ECH
Ahy20g0414 20 4202096 4211724 Ahy13g3377 13 130940219 130949634 ECH
Ahy13g3377 13 130940219 130949634 Ahy20g0414 20 4202096 4211724 PCT
Ahy13g3377 13 130940219 130949634 Ahy10g0231 10 2129441 2139109 PCT
Ahy20g0414 20 4202096 4211724 Ahy13g3377 13 130940219 130949634 PCT
Ahy10g0231 10 2129441 2139109 Ahy13g3377 13 130940219 130949634 PCT