Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g3359 ATGCCAGCACAGAAGCGGTTGCATGGGTCTCTGGAGGAGCACGAGGATGCTCTGCGCGCCAACAGCGTCGAGAAGCAAGAAGATGAAGTCGAATCCGATCGAAGCAACTCTTTGAGCAACGGCGACAAGGAGGAATATGTGGTTATAAAATTGGCAGATGTACGCAAGGAAGTTCAGTGCCCCATCTGCCTAGGCATCATTCGGAAAACAAGAACTGTAATGGAATGCCTGCATCGCTTTTGCAGAGAGTGCATAGACAAATCTATGCGTCTTGGTAACAATGAATGCCCCGCTTGCCGTACACATTGTGCTAGCCGACGCTCACTCAGGGATGATCCAAATTATGATGCCTTGATTGCTGCTCTCTATCCAGATATTGATAAGTATGAGGAGGAGGAATTGGCATTACATGAAGACGAGGTGACTCACAATAAACAGAAGATTCAAGCTTCCATTGCTCAGACTCTTAGACGACAGACAGAAGCATTGGGTAAGAAACGGAATGCTAAATCAGCAGCAGTGGCTTTTGTAAGGAGGTCACAAGGTAACTATCGAACCTCAAATATGAGGAGAAGAAAACGCTTCAGAAATGCAGGTGAACAAGAAGTATCCGATGACAATGAGGGTGTGAATGATAATGAAGGGGGGAAGGGCTCATCTTCCTGTGATGAGCAGACTGAAAACAGACCAAAAAGATGCAAAAGAGGCGGAGAAACACAGTTTCCTCAGCATTCTGCCTCTACTGAGGCTGATGTAGCCGGAGAGGAAAATACTCCTGAAGGGGATAGAGATGTCATAACTTCATCTGGTAGTACACTTGCCTGGGGGAAGAATGGACAGCGGAGTCACACCCGAGGAAATGGCAAGAATTCTGCCAATGGGAAAAATTCCAAAAACAGTCGCATCTCCAAGTTGGTTGATCGTCTTCACAGCTCTGAAGAAAATGATGACAGGTCGGATATCTTTCTTGTGGTTGTCTCTATGGATAAACAAAGAGGACCAAATTTGCAGGAGCCATACCTTCAGTGCAAGCCTACATTGTCAGTCAGTTCACTGAGCAAGTATGTTGCAGTTAAGACTGCACAGCAGCCAGATGATGTTGAGTTATGCTTGGTAGAAGAGCCGGGAGAGCCGCAAGTCAATATTATAAGAGGTGAAAGAACAGTTGATCCAAAAAAAGATAAGGTACGTGCTCTAGGAGAACAAGAAACGTTGGCTGAACTGAAAAGTTGTAACCTCATCCGTGGTTATCTGCTCATGGCTTATAAGAGGAAGTTGTAG 1281 0.4559 MPAQKRLHGSLEEHEDALRANSVEKQEDEVESDRSNSLSNGDKEEYVVIKLADVRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALIAALYPDIDKYEEEELALHEDEVTHNKQKIQASIAQTLRRQTEALGKKRNAKSAAVAFVRRSQGNYRTSNMRRRKRFRNAGEQEVSDDNEGVNDNEGGKGSSSCDEQTENRPKRCKRGGETQFPQHSASTEADVAGEENTPEGDRDVITSSGSTLAWGKNGQRSHTRGNGKNSANGKNSKNSRISKLVDRLHSSEENDDRSDIFLVVVSMDKQRGPNLQEPYLQCKPTLSVSSLSKYVAVKTAQQPDDVELCLVEEPGEPQVNIIRGERTVDPKKDKVRALGEQETLAELKSCNLIRGYLLMAYKRKL* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g3359 426 MobiDBLite consensus disorder prediction 263 300 - -
Ahy13g3359 426 PANTHER OS11G0578200 PROTEIN 1 425 IPR044592 -
Ahy13g3359 426 SUPERFAMILY RING/U-box 46 131 - -
Ahy13g3359 426 SMART ring_2 60 99 IPR001841 -
Ahy13g3359 426 Pfam Zinc finger, C3HC4 type (RING finger) 59 99 - -
Ahy13g3359 426 ProSitePatterns Zinc finger RING-type signature. 76 85 IPR017907 -
Ahy13g3359 426 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 9 130 IPR013083 -
Ahy13g3359 426 MobiDBLite consensus disorder prediction 183 300 - -
Ahy13g3359 426 CDD RING-HC_RING1_like 60 100 - -
Ahy13g3359 426 PANTHER OS11G0578200 PROTEIN 1 425 - -
Ahy13g3359 426 MobiDBLite consensus disorder prediction 224 238 - -
Ahy13g3359 426 ProSiteProfiles Zinc finger RING-type profile. 60 100 IPR001841 -
Ahy13g3359 426 MobiDBLite consensus disorder prediction 7 39 - -
Ahy13g3359 426 MobiDBLite consensus disorder prediction 1 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g3359 Ahy-Chr13 130720600 130725288 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g3359 51 195 C3H Transcription Factor Family AT2G30580 26.452 1.12e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g3359 K10695 - zju:107425269 493.426