Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g3358 ATGGAGGAGATTTCAACTTCAACCACAACTTCAACTTCAGCTTCAGGGTACAAGGAATATGTGGCAGGTTTGATCGCTGGCGTTGCCACTGTTGCCATTGGCCATCCATTTGACACCGTCAAGGTGAAACTGCAAAAGCACAACACAGGACAACATGTGGTTCGCTATAGAAGTGGATTGCATTGCACCACTAGGATATTGAAGACTGAAGGAGGAGGTGTTCAAAGTGGTGAACCGCAGCCTCAAGTGATAATACCATCTGCAGCTTATGGTGGTGCCATCATCAGTTTTGTGTTATGTCCGACGGAGCTGGTAAAGTGTAGGATGCAGATTCAAGGGACTGACTCTTTGGTTCCGAAGTCCAGTAGATACAGTAGTCCTCTTGATTGTGCCCTTAAAACCGTGAAAAGTGAAGGGGTGACAGGAATTTTTCGTGGAGGCTTTACAACATTGCTTAGAGAATCAATAGGGAATGCTGTCTTTTTCAGCACATATGAATATGTACGCTATCACCTGCATTCACATGCCAAAGCTGTTCGTTCCAATTACAATAACCTGGTTGATATTGGAATTGGGATAATTACCGGAGGTCTTGGTGGTGTGTCTTTTTGGTTGGCGGTTCTGCCCCTTGATGTAGCAAAGACTTTAATTCAGACAAACCCGGAAAAAAACTGTTCACGAAATCCTTTTCAGGTGCTGAGTTTGGTTTACAGGAGCGGTGGATTGAAGGGGTGTTATACAGGTCTGGGGCCTACAGTAACCCGAGCATTTCCTGCTAATGCAGCAGCAATTGTGACCTGGGAGCTAGCAATGAAAATGTTAGGCATTAGGCACGACTGA 840 0.4524 MEEISTSTTTSTSASGYKEYVAGLIAGVATVAIGHPFDTVKVKLQKHNTGQHVVRYRSGLHCTTRILKTEGGGVQSGEPQPQVIIPSAAYGGAIISFVLCPTELVKCRMQIQGTDSLVPKSSRYSSPLDCALKTVKSEGVTGIFRGGFTTLLRESIGNAVFFSTYEYVRYHLHSHAKAVRSNYNNLVDIGIGIITGGLGGVSFWLAVLPLDVAKTLIQTNPEKNCSRNPFQVLSLVYRSGGLKGCYTGLGPTVTRAFPANAAAIVTWELAMKMLGIRHD* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g3358 279 SUPERFAMILY Mitochondrial carrier 16 268 IPR023395 -
Ahy13g3358 279 ProSiteProfiles Solute carrier (Solcar) repeat profile. 79 171 IPR018108 -
Ahy13g3358 279 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 13 71 - -
Ahy13g3358 279 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 72 106 - -
Ahy13g3358 279 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 106 278 - -
Ahy13g3358 279 ProSiteProfiles Solute carrier (Solcar) repeat profile. 187 273 IPR018108 -
Ahy13g3358 279 PANTHER - 106 278 - -
Ahy13g3358 279 PANTHER - 72 106 - -
Ahy13g3358 279 Gene3D Mitochondrial carrier domain 3 74 IPR023395 -
Ahy13g3358 279 Gene3D Mitochondrial carrier domain 75 277 IPR023395 -
Ahy13g3358 279 PANTHER - 13 71 - -
Ahy13g3358 279 Pfam Mitochondrial carrier protein 17 71 IPR018108 -
Ahy13g3358 279 Pfam Mitochondrial carrier protein 87 173 IPR018108 -
Ahy13g3358 279 Pfam Mitochondrial carrier protein 193 274 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g3358 Ahy-Chr13 130704907 130709224 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g3358 92 274 Antiporters AT1G79900 33.155 7.45e-25 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g3358 K15109 - qsu:112032455 425.631
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g3358 13 130704907 130709224 Ahy13g3358 13 130704907 130709224 ECH
Ahy13g3358 13 130704907 130709224 Ahy3g3092 3 128283948 128288405 hybridization