Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g3351 ATGGATGAAGATAGCAGCAGCTCTTGGATAAGGAGGGCTAAGTTCTCTCACACAGTTTGTCACCGATTGGAGTATTCCAGATTGGGCTCTTTTCCTAACAGCATTCAGCGGCAGCAGAACTCAGGGACTCTGAAATCAAGGCCCGCAGCAGCACAACCAGCGCCGGCGCCGGCTGTGGCACCTGCAGTTCCTTATAATCCAAACTCTGTATCTAACATGTCACAGGTTCAGAGAAATCCAATAACGAATAGGCAGAGATCTTTGTCCCCTTTGCCGGTAACTCTTCTTTCCGATGCGTTTAAGGAAGCCCAGCATGAGAAGAAGAGGTTCTCAACTCCAACCACTCCTCGGAGGAAAGACCAGGAGAAGAGAATTATGGGGAAGTTAATGAACCAGGACTCTAAGCACTGTAGAGACACTAAGGTGTTGTCAAATTCAAAATCGCCTCAGGGTAGTCCAATTGGGCAACTTGCATCAATGAAATTGGGAGAGAAGTCAAAGCACCGCAAGGAATCTGCGTGGACAAAGTACTTTGACCATGGTGGAGGAAGGGTCACTGCTGTGGAAACAGCTGAAGAGTGGACTGTGGACCTCTCTAAGCTGTTCCTTGGTGTCAGATTCGCTTATGGGGCTCACAGTCGGCTTTACCATGGTATGTATAACGAAGAGCCTGTTGCTGTGAAGATTATCCGCGTGCCAGATGACGACGAAAATGGAAACATGGCTTATCGGTTGGAGAATCAGTTCATTAGAGAGGTCTCGCTTTTGTCTCGCCTCCATCATCAGAATGTTATAAAGTTTGTAGCAGCGTGCAGAAAACCACCTGTTTATTGTGTTATCACTGAATATCTAGCAGAAGGTTCCTTAAGAGCATATTTGCATAAATTGGAGAAAAAGACTATTTCTATGCAGAAACTAATTGCTTTTGCTCTGGATATTGCGCGCGGGATGGAATATATACACTCTCAAGGTGTCATTCATAGAGACCTTAAACCAGAGAATGTACTTATTAGCGAAGACTTTCACCTTAAAATTGCTGATTTTGGGATTGCTTGTGAGGAAGCATATTGTGACTTATTAGCTGACGACCCTGGTACGTACCGCTGGATGGCACCTGAGATGATCAAACGTAAATCCTACGGGAGAAAGGTTGATGTATATAGTTTTGGGCTTATCCTGTGGGAAATGGTAACCGGAACAATACCATATGAGGATATGACTCCCATCCAGGCTGCTTTTGCAGTGGTAAATAAGAATTCAAGGCCTGTTATTCCTTCCGATTGCCCACCTGCAATGCGCGCTTTAATCGAGCAATGTTGGTCCGTGCATCCAGACAAGAGGCCTGAGTTCTGGCAGGTTGTTAAGGTGTTAGAACAATTCGAATCATCACTTGCATTGGACGGAACCTTGACTCTGGTGCAAAACCCTTTGTGCCAGGATCATAAGAAAGGGCTTCTTCATTGGATTCAAAAACTTAGTCCTTCTCATCAAAATAGTGGTCCGGCACTTAAACCTAGATTCTCATGA 1527 0.4519 MDEDSSSSWIRRAKFSHTVCHRLEYSRLGSFPNSIQRQQNSGTLKSRPAAAQPAPAPAVAPAVPYNPNSVSNMSQVQRNPITNRQRSLSPLPVTLLSDAFKEAQHEKKRFSTPTTPRRKDQEKRIMGKLMNQDSKHCRDTKVLSNSKSPQGSPIGQLASMKLGEKSKHRKESAWTKYFDHGGGRVTAVETAEEWTVDLSKLFLGVRFAYGAHSRLYHGMYNEEPVAVKIIRVPDDDENGNMAYRLENQFIREVSLLSRLHHQNVIKFVAACRKPPVYCVITEYLAEGSLRAYLHKLEKKTISMQKLIAFALDIARGMEYIHSQGVIHRDLKPENVLISEDFHLKIADFGIACEEAYCDLLADDPGTYRWMAPEMIKRKSYGRKVDVYSFGLILWEMVTGTIPYEDMTPIQAAFAVVNKNSRPVIPSDCPPAMRALIEQCWSVHPDKRPEFWQVVKVLEQFESSLALDGTLTLVQNPLCQDHKKGLLHWIQKLSPSHQNSGPALKPRFS* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g3351 508 Gene3D Phosphorylase Kinase; domain 1 189 284 - -
Ahy13g3351 508 SMART serkin_6 201 460 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g3351 508 Pfam Protein tyrosine and serine/threonine kinase 209 457 IPR001245 GO:0004672|GO:0006468
Ahy13g3351 508 PANTHER TYROSINE KINASE FAMILY PROTEIN 4 484 - -
Ahy13g3351 508 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 4 484 - -
Ahy13g3351 508 PRINTS Tyrosine kinase catalytic domain signature 365 375 IPR001245 GO:0004672|GO:0006468
Ahy13g3351 508 PRINTS Tyrosine kinase catalytic domain signature 319 337 IPR001245 GO:0004672|GO:0006468
Ahy13g3351 508 PRINTS Tyrosine kinase catalytic domain signature 384 406 IPR001245 GO:0004672|GO:0006468
Ahy13g3351 508 PRINTS Tyrosine kinase catalytic domain signature 428 450 IPR001245 GO:0004672|GO:0006468
Ahy13g3351 508 PRINTS Tyrosine kinase catalytic domain signature 281 294 IPR001245 GO:0004672|GO:0006468
Ahy13g3351 508 SUPERFAMILY Protein kinase-like (PK-like) 184 457 IPR011009 -
Ahy13g3351 508 MobiDBLite consensus disorder prediction 33 47 - -
Ahy13g3351 508 MobiDBLite consensus disorder prediction 102 142 - -
Ahy13g3351 508 Gene3D Transferase(Phosphotransferase) domain 1 285 483 - -
Ahy13g3351 508 MobiDBLite consensus disorder prediction 33 73 - -
Ahy13g3351 508 CDD STKc_MAP3K-like 210 457 - -
Ahy13g3351 508 MobiDBLite consensus disorder prediction 102 156 - -
Ahy13g3351 508 ProSitePatterns Serine/Threonine protein kinases active-site signature. 325 337 IPR008271 GO:0004672|GO:0006468
Ahy13g3351 508 ProSiteProfiles Protein kinase domain profile. 201 461 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g3351 Ahy-Chr13 130545565 130549518 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g3351 1 496 MAP Kinase Kinase Kinase AT5G58950 58.627 0.0 602
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Ahy13g3351 PK_Tyr_Ser-Thr 1.40E-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g3351 - - gmx:100784454 784.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g3351 13 130545565 130549518 Ahy3g3082 3 128084204 128088202 hybridization
Ahy13g3351 13 130545565 130549518 Ahy20g0447 20 4502593 4505788 PCT
Ahy13g3351 13 130545565 130549518 Ahy10g0267 10 2389669 2392838 PCT
Ahy20g0447 20 4502593 4505788 Ahy13g3351 13 130545565 130549518 PCT
Ahy10g0267 10 2389669 2392838 Ahy13g3351 13 130545565 130549518 PCT