Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g3305 ATGGCTTATAGACGATGCCTCTTGAAAAGAGGGAACCTTGTAGACTGGAAGTGTCACCCGTCTTTCAGTTATGTACTCTACAGCGATGATGGGAAACACAAGCGCCCAGAAGAAAAATCATCCTCTGCAGCAATCAGTAATTTTGTCCAAACAAGGTTCTTCGGGAGTTCCCTTAATGGGTCAATGGGGTTTGGTGCCTCTTCTAGAGCGCTTTCCAACACATTCCTTTCCCCGTGCTCTGGATATAGTTTCTGCCGATATATGTCGACTGTGAATGATGGATCAGATAAGATTGAGTTGATGTCCGACATTGCAGATGTACTTACTGACAAGGCCGTTGAGACCATAGCTTCTCAGGCTCCTGTTGTTAACGAGGTTGCCATTGCTGCTGCTGATTCGTATTTGCCTGTGAAGTTGCTGCAGTATGGGATCGATGCTGTGCATACTTATACCGGGTTAAACTGGTGGGCCGCCATTGCTTTGGCAACCCTTGTGATTCGAAGCGCAACAGTTCCGTTCTTAATCTACCAACTTAAGGCTACATCTAAGCTTACATTGCTGAGGCCGCACATGGAAGCGATACGGGCTGAGATGGAATATAAGGCTATGGATCCGGTAGCTGCAGCTGAAAATCAAAAGAAGATGAAGCAGCTGTTTAAGGAATATGGTGTGAATCCGTTTACACCTTTGATGGGACTCTTTGTTCAAGCTCCTATCTTTATTAGCTTTTTTCTTGCGATATCAAACATGGCTGAAAAGGTGCCATCATTTAAGCATGGTGGAACCTACTGGTTTACTGATCTCACTACTCCAGATGCTTTATATGTTCTTCCTGTTTTGACTGCATTGTCGTTCTTAATAACAGTTGAGTGTAATATGCAAGAAGGCTTGGAAGGAAATCCTGTGGCTGGTACCATGAAAAATGTCTCTAGGGGTCTTGCTGTTCTTACAGTTCCCTTCACCATGGGGTTCCCAAAGGCCATATTTTGTTACTGGGTTACGTCAAATTTGTTTTCACTTGTGTATGGACTTGTGCTTAAAGTTCCTGGCATAAAGAAAACTTTAGGTATTCCTGAAATAGTTGCTGCAAAACCTACCACTGCTCCAGAACCACAATCTCCCTTTAATGTATTTCCAGCACTAAAAAAATCCACAGCAGAAGCAACTGAGCCAAGCTCATCACCAGTTGAACCATCAAAACATTCAAACAAAAAGATTTCTTCTTCTGCTGTTCTCAGCCAAAGGCTCAAAAGTTTAGAGAAACAAGTGAAAGGAAGAAAGAAAAACCTCAAGAGGTGA 1299 0.4311 MAYRRCLLKRGNLVDWKCHPSFSYVLYSDDGKHKRPEEKSSSAAISNFVQTRFFGSSLNGSMGFGASSRALSNTFLSPCSGYSFCRYMSTVNDGSDKIELMSDIADVLTDKAVETIASQAPVVNEVAIAAADSYLPVKLLQYGIDAVHTYTGLNWWAAIALATLVIRSATVPFLIYQLKATSKLTLLRPHMEAIRAEMEYKAMDPVAAAENQKKMKQLFKEYGVNPFTPLMGLFVQAPIFISFFLAISNMAEKVPSFKHGGTYWFTDLTTPDALYVLPVLTALSFLITVECNMQEGLEGNPVAGTMKNVSRGLAVLTVPFTMGFPKAIFCYWVTSNLFSLVYGLVLKVPGIKKTLGIPEIVAAKPTTAPEPQSPFNVFPALKKSTAEATEPSSSPVEPSKHSNKKISSSAVLSQRLKSLEKQVKGRKKNLKR* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g3305 432 TIGRFAM yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 154 344 IPR028055 -
Ahy13g3305 432 Coils Coil 416 432 - -
Ahy13g3305 432 PANTHER OXA1 75 405 IPR001708 GO:0016021|GO:0032977
Ahy13g3305 432 Pfam 60Kd inner membrane protein 155 344 IPR001708 GO:0016021|GO:0032977
Ahy13g3305 432 MobiDBLite consensus disorder prediction 386 416 - -
Ahy13g3305 432 MobiDBLite consensus disorder prediction 383 432 - -
Ahy13g3305 432 PANTHER MITOCHONDRIAL INNER MEMBRANE PROTEIN OXA1L 75 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g3305 Ahy-Chr13 130032424 130037890 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g3305 135 353 Chloroplast and Mitochondria Gene Families AT2G28800 26.316 1.68e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g3305 K03217 - gmx:100817052 655.981