Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g3304 ATGTCCATAAAGGAGGATGATGTTAAAAATGATTCTGATAATGATTTGGGTGATGATTTCGATTATCAACCGAATGCAGAAGATGATGCTGATGACGACGATGTGGATTCACTGGATTCCACTAGCAAGAGTGAAGAAGTTTGTGGTGTAAAAAGAATAGCGGATTTAATGGTAGAGGATATTTGGAACCTGGAGTTTAGGACGGAGGATGAGGCTTGCCAATTTTATAACGCTTATTCTTGTTGGCATGGATTTGTAATGAGGAAGGACGACGTGGTTAGGGATAATCAAGGTAGAATCATTAGCAGGCAACTTGTTTGCAATAAAGAGGGCTGGAGAAATATGAGGTATCTCGATCTGGATGATAGATCAAGGGAGGCAAGGTCACTAACGCGAACCAAGTGTCCAGCTCGGCTTAGGGTAAAGCTTGACTACGGCTGTCGTGGATGGAAGGTATCATGTTTTGTGGAATCTCACAACCACGATCTGACGCCACCCCAATTTGCGCATCTGGTACCGGCTAATCGTCGTCTCACTGTGACTGATAGAGTCCAAGTGAAAAATCTTCATAATTTTGGTGTCAAGAGCTGCCATATTATGGGGTATATTGCATTCCAGAAGGGTGGATATCGTCATGCTGGCTTCACACGGAAAGATTTGTACAACCACATCAATCGCTATCGTCGGGCAAAAGTTAAAAACGGGGATGCCAATGCGGCAATAAACTATTTGATTGGCAAGTCAAACAACGATCCGCTGTTCTTTGGAAAGTATACGTTCACTAGTGACGAAAGGCTGGAGCATATTTTTTGGGCAGATGGGCAGTCAATTATCGACTATCACTGCTTTGGAGATATTGTTGCCTTTGATTCTACCTACAAGAAGAATAAATACAACAAGCCTTTGGTCATTTTCTCTGGATGCAATCATCACGGGCAGACTGTTATCTTCGGCTCCGGCCTACTATCCGACGAAACCACAGAGACGTATAAGTGGTTGTTGAAAACCTTTGTTGAAGCGATGGGTGGGAAAAGTCCAAAAGCGGTAATAACTGACGGAGACCTTGCCATGCGAGATGCAATAAGGAATGTTCTGCCTGATGCGACCCATCGGTTATGTGGCTGGCATCTGCAGAGAAATGCATGTGAAAACATAAAGAATCCTAATTTCCTGCGCGATTTTAAGGGTTTTATATACGACAACAACGACCAGAGAGACTTCGATCGGAGATGGGCAGCCATTTTGGATAAGCACAACCTTGTTGGCAGTACCTGGATGGAAAAGACGTACGAAACTCGTGAGATGTGGTCCCATTGTTTCCTCCGGGATAAGTTTTTCGGTTACATAAGGACGACATCACAGTGTGAAGGTATAAATTCTCTCATCAGATTCTATGTTAATCGCAAGAACACCCTCATTGACTTCATGCATAACCTGGATAGGGCCTTAAAGGAGTATAGAAACAACGAGTTAATAGCTGACTTTAAGTCTCAGTGCTCAGAGCCAGTGATGATTACCTCGTTGGAGGTATATAAAAGATCTGCATCATGTTATTTCACGCGAAACATTTTCAAGGAAATTCGTAATGAGATTCAGAGGGCAGGGGCTTTGAATATAACGGTACTAAGCACAACCTTGGACAAGGTAGAGTTCAGTGTGACTGCTCTCGGAGACCCGGGCAAAGATCGACGGGTGGAAGTCGATAGAGGTAAGAATCTGTTCTCGTGCTCGTGCAAGCTGTTTGAATCACGTGGTATTCCCTGTAGTCATATCTTCTGTGCCATGAAGTTCGAAAACATACTTGAGTTTCCAGATTCGTTGATATACAAGAGGTGGACAAAGAATGCAAAGAACGAATTTATTAGCACAGAAATGCCTGTGAATGATGACATCGAAAGGGTCTTAAAGTTTCGAGTTGGAGCATTGGCATCGAATTGCAACAAGCTGTGTGATATTGCTTGCAAGGATCTTGCAGACTTTGATGAAGTCCAGTCTGAACTTGTCAATTTAGTTATCCGCCTGCAGTCACGCAAACAGGGCAAGTCAACTCCTAATGTTAACGTGGAAGGCATCAACGATCCCTTTGTTGTCAAAAGCAAAGGAGCCCCTTCCAAGAGGTCTTCTTGGAGGAAGAAGAGAGCATGCTCTAATTGCCACAAGTACGGTCATTACTACAAGCGCTGTCCAGATCTGATGCAGCATAGTGTGGAAGGTAACCCTCGCGATCAATCATACGGCAATGCATCAGCCAAGGACTCAGGTTTTAGTCCAGAAAGGTTTGCTAATTCTTCGAGGTCGTTCTCAATTAAGTCCGAACACCACTCAGGACCTAATACTAAGCCTTTTAAAAAGGGAGGAACAAGGAAGTTTACGGCGACGGGTATGAGGAACTGGAAGGGTAAAGATAACACCTTTGTGGAGGTGAAGGAGTCACAGCAGGACAAGAGACATTCATTCACGAACTATGAATGCAATAATGATGTCATTGATAATAAATGTGACACACGACATGTGCAGATGGATGTCCGAGATCAGTTACCGTCGTCACTGCCTTGTGGCAACAAACAAGGATCGTACATGGCATTGTTCGTGTCGATGCATAGGACACTTTGA 2613 0.4382 MSIKEDDVKNDSDNDLGDDFDYQPNAEDDADDDDVDSLDSTSKSEEVCGVKRIADLMVEDIWNLEFRTEDEACQFYNAYSCWHGFVMRKDDVVRDNQGRIISRQLVCNKEGWRNMRYLDLDDRSREARSLTRTKCPARLRVKLDYGCRGWKVSCFVESHNHDLTPPQFAHLVPANRRLTVTDRVQVKNLHNFGVKSCHIMGYIAFQKGGYRHAGFTRKDLYNHINRYRRAKVKNGDANAAINYLIGKSNNDPLFFGKYTFTSDERLEHIFWADGQSIIDYHCFGDIVAFDSTYKKNKYNKPLVIFSGCNHHGQTVIFGSGLLSDETTETYKWLLKTFVEAMGGKSPKAVITDGDLAMRDAIRNVLPDATHRLCGWHLQRNACENIKNPNFLRDFKGFIYDNNDQRDFDRRWAAILDKHNLVGSTWMEKTYETREMWSHCFLRDKFFGYIRTTSQCEGINSLIRFYVNRKNTLIDFMHNLDRALKEYRNNELIADFKSQCSEPVMITSLEVYKRSASCYFTRNIFKEIRNEIQRAGALNITVLSTTLDKVEFSVTALGDPGKDRRVEVDRGKNLFSCSCKLFESRGIPCSHIFCAMKFENILEFPDSLIYKRWTKNAKNEFISTEMPVNDDIERVLKFRVGALASNCNKLCDIACKDLADFDEVQSELVNLVIRLQSRKQGKSTPNVNVEGINDPFVVKSKGAPSKRSSWRKKRACSNCHKYGHYYKRCPDLMQHSVEGNPRDQSYGNASAKDSGFSPERFANSSRSFSIKSEHHSGPNTKPFKKGGTRKFTATGMRNWKGKDNTFVEVKESQQDKRHSFTNYECNNDVIDNKCDTRHVQMDVRDQLPSSLPCGNKQGSYMALFVSMHRTL* 871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g3304 870 MobiDBLite consensus disorder prediction 12 39 - -
Ahy13g3304 870 ProSiteProfiles Zinc finger CCHC-type profile. 715 730 IPR001878 GO:0003676|GO:0008270
Ahy13g3304 870 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 60 720 IPR031052 GO:0006355
Ahy13g3304 870 MobiDBLite consensus disorder prediction 1 42 - -
Ahy13g3304 870 PANTHER OS02G0262500 PROTEIN 60 720 - -
Ahy13g3304 870 Pfam FAR1 DNA-binding domain 74 164 IPR004330 -
Ahy13g3304 870 Pfam MULE transposase domain 286 380 IPR018289 -
Ahy13g3304 870 SUPERFAMILY Retrovirus zinc finger-like domains 701 733 IPR036875 GO:0003676|GO:0008270
Ahy13g3304 870 ProSiteProfiles Zinc finger SWIM-type profile. 563 599 IPR007527 GO:0008270
Ahy13g3304 870 MobiDBLite consensus disorder prediction 735 789 - -
Ahy13g3304 870 MobiDBLite consensus disorder prediction 737 775 - -
Ahy13g3304 870 SMART 26again6 574 601 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g3304 Ahy-Chr13 130000367 130003358 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy13g3304 MULE 6.00E-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g3304 - - ahf:112755379 1704.11