Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g3291 ATGGATAATGTTGTTACATTATTGTTAAAGTTAAAGCTGAGAAGCTTGTATAGTATAATGTTCTTACTTTATGTGTTGTGCTTAAGGGGTGTTATTGTGTCCTCTAGACATCATGAGAATGAGAGAAAAGTGACAACGATTATGAATAACAATAATAATAATAATAATGGTGATGTTGTGAGAGGCTTACCTGGCCAGCCTGCTGTGGATTTTGAGCACTATGCTGGCTATGTTACTGTCAATGAAACCAATGGAAGAGCACTCTTTTACTGGTTCTTTGAGGCCATTACCAACCCAGATGATAAGCCTTTGGTCCTATGGCTTAATGGAGGACCTGGATGTTCTTCTGTGGGATATGGAGCAACACAAGAGATTGGTCCATTTTTAGTGGACTCTGATGGGCAGGGACTCGAATTTAATAACTTGTCTTGGAACCAAGAAGCCAACATGTTATTCCTGGAATCTCCTGTTGGAGTTGGCTTTTCCTACTCAAACACAACTAGTGATTATGAACAATTGGGTGATCAAATGACAGCTAATGATGCTTACACTTTTCTCCACAACTGGTTCCTCAAGTTCCCATCCTATAGAACAAGGACTTTTTACATAGCAGGGGAGAGTTATGCAGGCAAGTATGTGCCGGAGCTGGCTGAACTCATCCATGATAGGAACAAGGACCCCTCCCTTCATATTAATCTCAAGGGCATTATGTTAGGAAATCCAGAAACATCTGATGCTGAGGATTGGATAGGGCTAGTAGACTATGCTTGGAGTCATGCAATCATATCAGACGAGACTCACAAAACAATAAAAACAAGTTGTGACTTCAACAGCAGCGATCCATGGCGTAACCAAGATTGCAGTGAAGCAGTAGATGAAGTCCTCAAACAATACAGAGAAATTGATATATACAGCCTCTACACCTCTACTTGCTTTGCCTCTACAGCGCGCTCTTCCATGGCGCGCTCATCATCATCTACAACAATGATGCCTAGAATGATGGGTGGTTATGACCCATGCTTGGATGACTATGCTAGAGCTTATTATAATAGACCCGATGTTCAGAAGGCCCTACATGCTGGTGATGGCCACAATCTCAAGAATTGGAGTATTTGCAACAATGATATATTCAATGGATGGGGAGATTCAAAGGCAAGTGTAGTGCCAATATACAGGAAGCTAATATCAGGAGGAGGACTTAGGATATGGATTTACAGTGGAGACACAGATGGAAGAGTGCCAGTGCTGTCAACAAGGTATAGCTTAAGTTCTCTTGAATTGAGAGTGAGAAAGGCATGGAGACCATGGTACCATGAGAATGAGGTGAGTGGGTGGGTAGAAGAATACGAAGGGCTAACATTTGCTACTTTCAGAGGAGCTGGCCACGCTGTTCCATGTTTCAAACCAAGTAGCTCTCTCGCCTTCTTCTCTTCCTTCCTTCGTGGACAATCCCCTCCTTCTACTAAATAA 1470 0.4231 MDNVVTLLLKLKLRSLYSIMFLLYVLCLRGVIVSSRHHENERKVTTIMNNNNNNNNGDVVRGLPGQPAVDFEHYAGYVTVNETNGRALFYWFFEAITNPDDKPLVLWLNGGPGCSSVGYGATQEIGPFLVDSDGQGLEFNNLSWNQEANMLFLESPVGVGFSYSNTTSDYEQLGDQMTANDAYTFLHNWFLKFPSYRTRTFYIAGESYAGKYVPELAELIHDRNKDPSLHINLKGIMLGNPETSDAEDWIGLVDYAWSHAIISDETHKTIKTSCDFNSSDPWRNQDCSEAVDEVLKQYREIDIYSLYTSTCFASTARSSMARSSSSTTMMPRMMGGYDPCLDDYARAYYNRPDVQKALHAGDGHNLKNWSICNNDIFNGWGDSKASVVPIYRKLISGGGLRIWIYSGDTDGRVPVLSTRYSLSSLELRVRKAWRPWYHENEVSGWVEEYEGLTFATFRGAGHAVPCFKPSSSLAFFSSFLRGQSPPSTK* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g3291 489 PANTHER CARBOXYPEPTIDASE 17 485 - -
Ahy13g3291 489 ProSitePatterns Serine carboxypeptidases, serine active site. 203 210 IPR018202 GO:0004185
Ahy13g3291 489 Gene3D alpha/beta hydrolase 55 313 IPR029058 -
Ahy13g3291 489 Gene3D - 340 378 - -
Ahy13g3291 489 PRINTS Carboxypeptidase C serine protease (S10) family signature 153 163 IPR001563 GO:0004185|GO:0006508
Ahy13g3291 489 PRINTS Carboxypeptidase C serine protease (S10) family signature 452 465 IPR001563 GO:0004185|GO:0006508
Ahy13g3291 489 PRINTS Carboxypeptidase C serine protease (S10) family signature 189 214 IPR001563 GO:0004185|GO:0006508
Ahy13g3291 489 PRINTS Carboxypeptidase C serine protease (S10) family signature 140 152 IPR001563 GO:0004185|GO:0006508
Ahy13g3291 489 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 17 485 IPR001563 GO:0004185|GO:0006508
Ahy13g3291 489 SUPERFAMILY alpha/beta-Hydrolases 56 484 IPR029058 -
Ahy13g3291 489 Pfam Serine carboxypeptidase 65 482 IPR001563 GO:0004185|GO:0006508
Ahy13g3291 489 Gene3D - 387 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g3291 Ahy-Chr13 129783738 129786359 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g3291 345 483 Calmodulin-binding Proteins AT2G22960 34.286 2.09e-15 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g3291 K16297 - gmx:100793427 784.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g3291 13 129783738 129786359 Ahy3g3029 3 127236187 127238608 hybridization
Ahy13g3291 13 129783738 129786359 Ahy20g0498 20 5084519 5088536 PCT
Ahy13g3291 13 129783738 129786359 Ahy10g0313 10 2885192 2889112 PCT
Ahy20g0498 20 5084519 5088536 Ahy13g3291 13 129783738 129786359 PCT
Ahy10g0313 10 2885192 2889112 Ahy13g3291 13 129783738 129786359 PCT